Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
TPM3P06753 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TPM3P06753 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TPM3P06753 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TPM3P06753 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TPM3P06753 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
TPM3P06753 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TPM3P06753 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
TPM3P06753 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC24.58■■□□□ 1.52
TPM3P06753 AC073130.3-201ENST00000624389 2278 ntBASIC24.58■■□□□ 1.52
TPM3P06753 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TPM3P06753 AL353803.4-201ENST00000565882 1934 ntBASIC24.57■■□□□ 1.52
TPM3P06753 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TPM3P06753 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TPM3P06753 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
TPM3P06753 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.57■■□□□ 1.52
TPM3P06753 AC129492.7-201ENST00000622992 756 ntBASIC24.57■■□□□ 1.52
TPM3P06753 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
TPM3P06753 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
TPM3P06753 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
TPM3P06753 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
TPM3P06753 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TPM3P06753 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
TPM3P06753 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TPM3P06753 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.56■■□□□ 1.52
TPM3P06753 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
TPM3P06753 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
TPM3P06753 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.56■■□□□ 1.52
TPM3P06753 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TPM3P06753 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TPM3P06753 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TPM3P06753 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.56■■□□□ 1.52
TPM3P06753 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.56■■□□□ 1.52
TPM3P06753 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.56■■□□□ 1.52
TPM3P06753 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
TPM3P06753 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
TPM3P06753 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TPM3P06753 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
TPM3P06753 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TPM3P06753 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TPM3P06753 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.55■■□□□ 1.52
TPM3P06753 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
TPM3P06753 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.55■■□□□ 1.52
TPM3P06753 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
TPM3P06753 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
TPM3P06753 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
TPM3P06753 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.55■■□□□ 1.52
TPM3P06753 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
TPM3P06753 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.55■■□□□ 1.52
TPM3P06753 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.55■■□□□ 1.52
TPM3P06753 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TPM3P06753 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
TPM3P06753 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.54■■□□□ 1.52
TPM3P06753 AC139795.1-202ENST00000500444 432 ntBASIC24.54■■□□□ 1.52
TPM3P06753 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.54■■□□□ 1.52
TPM3P06753 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.54■■□□□ 1.52
TPM3P06753 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.54■■□□□ 1.52
TPM3P06753 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
TPM3P06753 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
TPM3P06753 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
TPM3P06753 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TPM3P06753 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
TPM3P06753 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
TPM3P06753 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
TPM3P06753 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC24.53■■□□□ 1.52
TPM3P06753 FAM99A-202ENST00000538190 1989 ntBASIC24.53■■□□□ 1.52
TPM3P06753 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TPM3P06753 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TPM3P06753 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC24.52■■□□□ 1.52
TPM3P06753 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TPM3P06753 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.52■■□□□ 1.52
TPM3P06753 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TPM3P06753 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.52■■□□□ 1.52
TPM3P06753 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TPM3P06753 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
TPM3P06753 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TPM3P06753 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TPM3P06753 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TPM3P06753 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TPM3P06753 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC24.51■■□□□ 1.51
TPM3P06753 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TPM3P06753 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
TPM3P06753 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
TPM3P06753 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TPM3P06753 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.51■■□□□ 1.51
TPM3P06753 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
TPM3P06753 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TPM3P06753 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
TPM3P06753 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.5■■□□□ 1.51
TPM3P06753 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC24.5■■□□□ 1.51
TPM3P06753 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
TPM3P06753 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.5■■□□□ 1.51
TPM3P06753 AC004448.1-201ENST00000458332 883 ntBASIC24.5■■□□□ 1.51
TPM3P06753 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
TPM3P06753 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TPM3P06753 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.5■■□□□ 1.51
TPM3P06753 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TPM3P06753 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TPM3P06753 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.49■■□□□ 1.51
TPM3P06753 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 202 ms