Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 AC087239.1-201ENST00000622671 572 ntBASIC20.22■□□□□ 0.83
CEACAM4O75871 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.22■□□□□ 0.83
CEACAM4O75871 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.22■□□□□ 0.83
CEACAM4O75871 AC079630.1-202ENST00000618127 1840 ntBASIC20.22■□□□□ 0.83
CEACAM4O75871 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.22■□□□□ 0.83
CEACAM4O75871 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CEACAM4O75871 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CEACAM4O75871 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CEACAM4O75871 AC026185.1-201ENST00000445748 174 ntBASIC20.21■□□□□ 0.83
CEACAM4O75871 BID-214ENST00000617586 542 ntTSL 5 BASIC20.21■□□□□ 0.83
CEACAM4O75871 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.21■□□□□ 0.83
CEACAM4O75871 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.21■□□□□ 0.83
CEACAM4O75871 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CEACAM4O75871 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CEACAM4O75871 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CEACAM4O75871 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CEACAM4O75871 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.21■□□□□ 0.83
CEACAM4O75871 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CEACAM4O75871 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CEACAM4O75871 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.2■□□□□ 0.82
CEACAM4O75871 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CEACAM4O75871 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.2■□□□□ 0.82
CEACAM4O75871 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CEACAM4O75871 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.2■□□□□ 0.82
CEACAM4O75871 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.2■□□□□ 0.82
CEACAM4O75871 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.2■□□□□ 0.82
CEACAM4O75871 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CEACAM4O75871 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CEACAM4O75871 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CEACAM4O75871 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CEACAM4O75871 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CEACAM4O75871 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CEACAM4O75871 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CEACAM4O75871 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.19■□□□□ 0.82
CEACAM4O75871 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CEACAM4O75871 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.19■□□□□ 0.82
CEACAM4O75871 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.19■□□□□ 0.82
CEACAM4O75871 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.19■□□□□ 0.82
CEACAM4O75871 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CEACAM4O75871 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CEACAM4O75871 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.18■□□□□ 0.82
CEACAM4O75871 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CEACAM4O75871 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CEACAM4O75871 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.18■□□□□ 0.82
CEACAM4O75871 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.18■□□□□ 0.82
CEACAM4O75871 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
CEACAM4O75871 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CEACAM4O75871 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CEACAM4O75871 LINC00543-201ENST00000567234 1845 ntBASIC20.18■□□□□ 0.82
CEACAM4O75871 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CEACAM4O75871 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CEACAM4O75871 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CEACAM4O75871 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CEACAM4O75871 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CEACAM4O75871 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CEACAM4O75871 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.17■□□□□ 0.82
CEACAM4O75871 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CEACAM4O75871 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.17■□□□□ 0.82
CEACAM4O75871 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.17■□□□□ 0.82
CEACAM4O75871 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CEACAM4O75871 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.17■□□□□ 0.82
CEACAM4O75871 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.17■□□□□ 0.82
CEACAM4O75871 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.17■□□□□ 0.82
CEACAM4O75871 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CEACAM4O75871 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.16■□□□□ 0.82
CEACAM4O75871 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CEACAM4O75871 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CEACAM4O75871 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.16■□□□□ 0.82
CEACAM4O75871 KRT18P11-201ENST00000435214 1283 ntBASIC20.16■□□□□ 0.82
CEACAM4O75871 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CEACAM4O75871 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.16■□□□□ 0.82
CEACAM4O75871 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CEACAM4O75871 OXCT2P1-201ENST00000447263 1535 ntBASIC20.16■□□□□ 0.82
CEACAM4O75871 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CEACAM4O75871 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CEACAM4O75871 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CEACAM4O75871 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CEACAM4O75871 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CEACAM4O75871 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CEACAM4O75871 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.15■□□□□ 0.82
CEACAM4O75871 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.15■□□□□ 0.82
CEACAM4O75871 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.15■□□□□ 0.82
CEACAM4O75871 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.15■□□□□ 0.82
CEACAM4O75871 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CEACAM4O75871 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.15■□□□□ 0.82
CEACAM4O75871 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.15■□□□□ 0.82
CEACAM4O75871 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.15■□□□□ 0.82
CEACAM4O75871 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CEACAM4O75871 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CEACAM4O75871 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CEACAM4O75871 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CEACAM4O75871 AL353803.4-201ENST00000565882 1934 ntBASIC20.14■□□□□ 0.81
CEACAM4O75871 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CEACAM4O75871 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CEACAM4O75871 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.14■□□□□ 0.81
CEACAM4O75871 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CEACAM4O75871 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.14■□□□□ 0.81
CEACAM4O75871 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.14■□□□□ 0.81
CEACAM4O75871 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CEACAM4O75871 CROCCP5-201ENST00000436658 830 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms