Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.73■■□□□ 1.39
LRRC53A6NM62 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.73■■□□□ 1.39
LRRC53A6NM62 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRC53A6NM62 AC239859.2-201ENST00000444165 318 ntBASIC23.73■■□□□ 1.39
LRRC53A6NM62 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.73■■□□□ 1.39
LRRC53A6NM62 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LRRC53A6NM62 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRC53A6NM62 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.73■■□□□ 1.39
LRRC53A6NM62 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
LRRC53A6NM62 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
LRRC53A6NM62 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC53A6NM62 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
LRRC53A6NM62 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.72■■□□□ 1.39
LRRC53A6NM62 AC004687.1-201ENST00000579003 1625 ntBASIC23.72■■□□□ 1.39
LRRC53A6NM62 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC53A6NM62 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.72■■□□□ 1.39
LRRC53A6NM62 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.72■■□□□ 1.39
LRRC53A6NM62 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC53A6NM62 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC53A6NM62 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC53A6NM62 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.71■■□□□ 1.39
LRRC53A6NM62 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC53A6NM62 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.71■■□□□ 1.39
LRRC53A6NM62 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC53A6NM62 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.71■■□□□ 1.39
LRRC53A6NM62 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.71■■□□□ 1.39
LRRC53A6NM62 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC53A6NM62 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC53A6NM62 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.7■■□□□ 1.39
LRRC53A6NM62 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
LRRC53A6NM62 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRRC53A6NM62 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
LRRC53A6NM62 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.38
LRRC53A6NM62 AC010997.5-201ENST00000609182 354 ntBASIC23.7■■□□□ 1.38
LRRC53A6NM62 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRRC53A6NM62 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRRC53A6NM62 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.7■■□□□ 1.38
LRRC53A6NM62 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRRC53A6NM62 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
LRRC53A6NM62 C17orf82-201ENST00000623772 1530 ntBASIC23.69■■□□□ 1.38
LRRC53A6NM62 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
LRRC53A6NM62 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.69■■□□□ 1.38
LRRC53A6NM62 TSPY9P-201ENST00000440215 945 ntBASIC23.69■■□□□ 1.38
LRRC53A6NM62 TSPY11P-201ENST00000442607 1045 ntBASIC23.69■■□□□ 1.38
LRRC53A6NM62 AC009299.2-201ENST00000482477 511 ntBASIC23.69■■□□□ 1.38
LRRC53A6NM62 FBXW4P1-201ENST00000426721 2239 ntBASIC23.69■■□□□ 1.38
LRRC53A6NM62 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.69■■□□□ 1.38
LRRC53A6NM62 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
LRRC53A6NM62 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.68■■□□□ 1.38
LRRC53A6NM62 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC53A6NM62 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC53A6NM62 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC53A6NM62 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.68■■□□□ 1.38
LRRC53A6NM62 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC53A6NM62 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.68■■□□□ 1.38
LRRC53A6NM62 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.68■■□□□ 1.38
LRRC53A6NM62 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC53A6NM62 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.68■■□□□ 1.38
LRRC53A6NM62 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC53A6NM62 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC53A6NM62 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LRRC53A6NM62 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
LRRC53A6NM62 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRC53A6NM62 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.67■■□□□ 1.38
LRRC53A6NM62 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRC53A6NM62 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRC53A6NM62 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
LRRC53A6NM62 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.67■■□□□ 1.38
LRRC53A6NM62 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
LRRC53A6NM62 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
LRRC53A6NM62 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
LRRC53A6NM62 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
LRRC53A6NM62 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
LRRC53A6NM62 AL451085.2-201ENST00000605085 799 ntBASIC23.66■■□□□ 1.38
LRRC53A6NM62 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.66■■□□□ 1.38
LRRC53A6NM62 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC53A6NM62 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
LRRC53A6NM62 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC53A6NM62 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
LRRC53A6NM62 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC53A6NM62 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC53A6NM62 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC53A6NM62 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC53A6NM62 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.65■■□□□ 1.38
LRRC53A6NM62 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.65■■□□□ 1.38
LRRC53A6NM62 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC53A6NM62 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.65■■□□□ 1.38
LRRC53A6NM62 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC53A6NM62 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
LRRC53A6NM62 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
LRRC53A6NM62 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
LRRC53A6NM62 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.64■■□□□ 1.38
LRRC53A6NM62 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LRRC53A6NM62 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LRRC53A6NM62 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.64■■□□□ 1.37
LRRC53A6NM62 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
LRRC53A6NM62 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.64■■□□□ 1.37
LRRC53A6NM62 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
LRRC53A6NM62 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.64■■□□□ 1.37
LRRC53A6NM62 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms