Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHA13Q9Y5I0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA13Q9Y5I0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA13Q9Y5I0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA13Q9Y5I0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHA13Q9Y5I0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.59■■□□□ 1.37
PCDHA13Q9Y5I0 AC137630.3-201ENST00000607245 391 ntBASIC23.59■■□□□ 1.37
PCDHA13Q9Y5I0 FP325331.1-202ENST00000623531 1380 ntBASIC23.59■■□□□ 1.37
PCDHA13Q9Y5I0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
PCDHA13Q9Y5I0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PCDHA13Q9Y5I0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
PCDHA13Q9Y5I0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHA13Q9Y5I0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDHA13Q9Y5I0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.58■■□□□ 1.37
PCDHA13Q9Y5I0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHA13Q9Y5I0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDHA13Q9Y5I0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHA13Q9Y5I0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
PCDHA13Q9Y5I0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDHA13Q9Y5I0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
PCDHA13Q9Y5I0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHA13Q9Y5I0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
PCDHA13Q9Y5I0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.58■■□□□ 1.36
PCDHA13Q9Y5I0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHA13Q9Y5I0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA13Q9Y5I0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA13Q9Y5I0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA13Q9Y5I0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHA13Q9Y5I0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDHA13Q9Y5I0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
PCDHA13Q9Y5I0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHA13Q9Y5I0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHA13Q9Y5I0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHA13Q9Y5I0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHA13Q9Y5I0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHA13Q9Y5I0 KRT8P33-201ENST00000508125 1423 ntBASIC23.56■■□□□ 1.36
PCDHA13Q9Y5I0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
PCDHA13Q9Y5I0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
PCDHA13Q9Y5I0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHA13Q9Y5I0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDHA13Q9Y5I0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA13Q9Y5I0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
PCDHA13Q9Y5I0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHA13Q9Y5I0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHA13Q9Y5I0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHA13Q9Y5I0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDHA13Q9Y5I0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHA13Q9Y5I0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
PCDHA13Q9Y5I0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA13Q9Y5I0 AC005703.6-201ENST00000623265 1329 ntBASIC23.55■■□□□ 1.36
PCDHA13Q9Y5I0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHA13Q9Y5I0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
PCDHA13Q9Y5I0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA13Q9Y5I0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDHA13Q9Y5I0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.54■■□□□ 1.36
PCDHA13Q9Y5I0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.54■■□□□ 1.36
PCDHA13Q9Y5I0 AL033527.3-201ENST00000566366 1196 ntBASIC23.54■■□□□ 1.36
PCDHA13Q9Y5I0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
PCDHA13Q9Y5I0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHA13Q9Y5I0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.54■■□□□ 1.36
PCDHA13Q9Y5I0 MIR6722-201ENST00000617286 78 ntBASIC23.54■■□□□ 1.36
PCDHA13Q9Y5I0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.54■■□□□ 1.36
PCDHA13Q9Y5I0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PCDHA13Q9Y5I0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHA13Q9Y5I0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHA13Q9Y5I0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHA13Q9Y5I0 YBX1P4-201ENST00000392794 808 ntBASIC23.53■■□□□ 1.36
PCDHA13Q9Y5I0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHA13Q9Y5I0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHA13Q9Y5I0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHA13Q9Y5I0 AC012354.3-201ENST00000623734 483 ntBASIC23.53■■□□□ 1.36
PCDHA13Q9Y5I0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHA13Q9Y5I0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.53■■□□□ 1.36
PCDHA13Q9Y5I0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDHA13Q9Y5I0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHA13Q9Y5I0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA13Q9Y5I0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA13Q9Y5I0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA13Q9Y5I0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA13Q9Y5I0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA13Q9Y5I0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.52■■□□□ 1.36
PCDHA13Q9Y5I0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDHA13Q9Y5I0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA13Q9Y5I0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.52■■□□□ 1.36
PCDHA13Q9Y5I0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHA13Q9Y5I0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHA13Q9Y5I0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
PCDHA13Q9Y5I0 LINC01960-201ENST00000563759 1884 ntBASIC23.51■■□□□ 1.35
PCDHA13Q9Y5I0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
PCDHA13Q9Y5I0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHA13Q9Y5I0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.51■■□□□ 1.35
PCDHA13Q9Y5I0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHA13Q9Y5I0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHA13Q9Y5I0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHA13Q9Y5I0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHA13Q9Y5I0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHA13Q9Y5I0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.51■■□□□ 1.35
PCDHA13Q9Y5I0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
PCDHA13Q9Y5I0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHA13Q9Y5I0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms