Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
PCDHGC3Q9UN70 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PCDHGC3Q9UN70 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.37■■□□□ 1.33
PCDHGC3Q9UN70 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHGC3Q9UN70 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGC3Q9UN70 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.36■■□□□ 1.33
PCDHGC3Q9UN70 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHGC3Q9UN70 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.36■■□□□ 1.33
PCDHGC3Q9UN70 AC127496.7-201ENST00000625110 1798 ntBASIC23.36■■□□□ 1.33
PCDHGC3Q9UN70 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.36■■□□□ 1.33
PCDHGC3Q9UN70 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHGC3Q9UN70 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDHGC3Q9UN70 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGC3Q9UN70 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
PCDHGC3Q9UN70 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
PCDHGC3Q9UN70 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDHGC3Q9UN70 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDHGC3Q9UN70 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGC3Q9UN70 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
PCDHGC3Q9UN70 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGC3Q9UN70 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGC3Q9UN70 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHGC3Q9UN70 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGC3Q9UN70 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHGC3Q9UN70 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGC3Q9UN70 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
PCDHGC3Q9UN70 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGC3Q9UN70 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGC3Q9UN70 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHGC3Q9UN70 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHGC3Q9UN70 LINC01960-201ENST00000563759 1884 ntBASIC23.34■■□□□ 1.33
PCDHGC3Q9UN70 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGC3Q9UN70 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGC3Q9UN70 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGC3Q9UN70 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGC3Q9UN70 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGC3Q9UN70 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
PCDHGC3Q9UN70 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGC3Q9UN70 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGC3Q9UN70 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGC3Q9UN70 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
PCDHGC3Q9UN70 AC011298.3-201ENST00000615796 283 ntBASIC23.33■■□□□ 1.33
PCDHGC3Q9UN70 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGC3Q9UN70 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHGC3Q9UN70 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGC3Q9UN70 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGC3Q9UN70 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
PCDHGC3Q9UN70 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGC3Q9UN70 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGC3Q9UN70 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGC3Q9UN70 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGC3Q9UN70 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGC3Q9UN70 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGC3Q9UN70 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
PCDHGC3Q9UN70 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PCDHGC3Q9UN70 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
PCDHGC3Q9UN70 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDHGC3Q9UN70 AC008406.3-201ENST00000620001 1374 ntBASIC23.31■■□□□ 1.32
PCDHGC3Q9UN70 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDHGC3Q9UN70 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGC3Q9UN70 OR2I1P-207ENST00000453522 948 ntBASIC23.31■■□□□ 1.32
PCDHGC3Q9UN70 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDHGC3Q9UN70 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGC3Q9UN70 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGC3Q9UN70 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGC3Q9UN70 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGC3Q9UN70 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 AC136469.2-201ENST00000623944 1028 ntBASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 AL031602.1-201ENST00000633169 911 ntBASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHGC3Q9UN70 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHGC3Q9UN70 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGC3Q9UN70 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
PCDHGC3Q9UN70 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
PCDHGC3Q9UN70 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDHGC3Q9UN70 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PCDHGC3Q9UN70 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGC3Q9UN70 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGC3Q9UN70 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGC3Q9UN70 AL117328.2-201ENST00000624617 1940 ntBASIC23.29■■□□□ 1.32
PCDHGC3Q9UN70 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGC3Q9UN70 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PCDHGC3Q9UN70 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGC3Q9UN70 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms