Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
BRD9Q9H8M2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
BRD9Q9H8M2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
BRD9Q9H8M2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
BRD9Q9H8M2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
BRD9Q9H8M2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
BRD9Q9H8M2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
BRD9Q9H8M2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
BRD9Q9H8M2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.88■■□□□ 1.25
BRD9Q9H8M2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.88■■□□□ 1.25
BRD9Q9H8M2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.88■■□□□ 1.25
BRD9Q9H8M2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
BRD9Q9H8M2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
BRD9Q9H8M2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
BRD9Q9H8M2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.88■■□□□ 1.25
BRD9Q9H8M2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
BRD9Q9H8M2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
BRD9Q9H8M2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
BRD9Q9H8M2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.87■■□□□ 1.25
BRD9Q9H8M2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
BRD9Q9H8M2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.87■■□□□ 1.25
BRD9Q9H8M2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
BRD9Q9H8M2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
BRD9Q9H8M2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
BRD9Q9H8M2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.87■■□□□ 1.25
BRD9Q9H8M2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
BRD9Q9H8M2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
BRD9Q9H8M2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
BRD9Q9H8M2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.86■■□□□ 1.25
BRD9Q9H8M2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.86■■□□□ 1.25
BRD9Q9H8M2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.86■■□□□ 1.25
BRD9Q9H8M2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
BRD9Q9H8M2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
BRD9Q9H8M2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
BRD9Q9H8M2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
BRD9Q9H8M2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
BRD9Q9H8M2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
BRD9Q9H8M2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
BRD9Q9H8M2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
BRD9Q9H8M2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
BRD9Q9H8M2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
BRD9Q9H8M2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.85■■□□□ 1.25
BRD9Q9H8M2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
BRD9Q9H8M2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
BRD9Q9H8M2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.85■■□□□ 1.25
BRD9Q9H8M2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.85■■□□□ 1.25
BRD9Q9H8M2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
BRD9Q9H8M2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.85■■□□□ 1.25
BRD9Q9H8M2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
BRD9Q9H8M2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
BRD9Q9H8M2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
BRD9Q9H8M2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.85■■□□□ 1.25
BRD9Q9H8M2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
BRD9Q9H8M2 AC004812.2-201ENST00000611079 2094 ntBASIC22.85■■□□□ 1.25
BRD9Q9H8M2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.84■■□□□ 1.25
BRD9Q9H8M2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.84■■□□□ 1.25
BRD9Q9H8M2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.84■■□□□ 1.25
BRD9Q9H8M2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.84■■□□□ 1.25
BRD9Q9H8M2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
BRD9Q9H8M2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
BRD9Q9H8M2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
BRD9Q9H8M2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
BRD9Q9H8M2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
BRD9Q9H8M2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
BRD9Q9H8M2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.83■■□□□ 1.25
BRD9Q9H8M2 AC016769.1-201ENST00000409132 1010 ntBASIC22.83■■□□□ 1.25
BRD9Q9H8M2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
BRD9Q9H8M2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.83■■□□□ 1.25
BRD9Q9H8M2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
BRD9Q9H8M2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.83■■□□□ 1.24
BRD9Q9H8M2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
BRD9Q9H8M2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
BRD9Q9H8M2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
BRD9Q9H8M2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.82■■□□□ 1.24
BRD9Q9H8M2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
BRD9Q9H8M2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
BRD9Q9H8M2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.82■■□□□ 1.24
BRD9Q9H8M2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
BRD9Q9H8M2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.82■■□□□ 1.24
BRD9Q9H8M2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.82■■□□□ 1.24
BRD9Q9H8M2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.82■■□□□ 1.24
BRD9Q9H8M2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.82■■□□□ 1.24
BRD9Q9H8M2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.82■■□□□ 1.24
BRD9Q9H8M2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
BRD9Q9H8M2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
BRD9Q9H8M2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.81■■□□□ 1.24
BRD9Q9H8M2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.81■■□□□ 1.24
BRD9Q9H8M2 HLA-L-209ENST00000420110 1011 ntBASIC22.81■■□□□ 1.24
BRD9Q9H8M2 AC080038.1-201ENST00000611274 1154 ntBASIC22.81■■□□□ 1.24
BRD9Q9H8M2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
BRD9Q9H8M2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
BRD9Q9H8M2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
BRD9Q9H8M2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
BRD9Q9H8M2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
BRD9Q9H8M2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.8■■□□□ 1.24
BRD9Q9H8M2 AC137761.2-201ENST00000561729 223 ntBASIC22.8■■□□□ 1.24
BRD9Q9H8M2 AC145350.3-201ENST00000569033 163 ntBASIC22.8■■□□□ 1.24
BRD9Q9H8M2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.8■■□□□ 1.24
BRD9Q9H8M2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.8■■□□□ 1.24
BRD9Q9H8M2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms