Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.14■■□□□ 1.13
SLC44A1Q8WWI5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC44A1Q8WWI5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
SLC44A1Q8WWI5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SLC44A1Q8WWI5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
SLC44A1Q8WWI5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC44A1Q8WWI5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.13■■□□□ 1.13
SLC44A1Q8WWI5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC44A1Q8WWI5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.13■■□□□ 1.13
SLC44A1Q8WWI5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.13■■□□□ 1.13
SLC44A1Q8WWI5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.13■■□□□ 1.13
SLC44A1Q8WWI5 AC103724.3-201ENST00000564481 992 ntBASIC22.13■■□□□ 1.13
SLC44A1Q8WWI5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC44A1Q8WWI5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC44A1Q8WWI5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC44A1Q8WWI5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC44A1Q8WWI5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SLC44A1Q8WWI5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SLC44A1Q8WWI5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
SLC44A1Q8WWI5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC44A1Q8WWI5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SLC44A1Q8WWI5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC44A1Q8WWI5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
SLC44A1Q8WWI5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC44A1Q8WWI5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
SLC44A1Q8WWI5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.11■■□□□ 1.13
SLC44A1Q8WWI5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.11■■□□□ 1.13
SLC44A1Q8WWI5 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.11■■□□□ 1.13
SLC44A1Q8WWI5 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SLC44A1Q8WWI5 AC005703.6-201ENST00000623265 1329 ntBASIC22.11■■□□□ 1.13
SLC44A1Q8WWI5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SLC44A1Q8WWI5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.11■■□□□ 1.13
SLC44A1Q8WWI5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.11■■□□□ 1.13
SLC44A1Q8WWI5 MIR6722-201ENST00000617286 78 ntBASIC22.11■■□□□ 1.13
SLC44A1Q8WWI5 AC012354.3-201ENST00000623734 483 ntBASIC22.11■■□□□ 1.13
SLC44A1Q8WWI5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.11■■□□□ 1.13
SLC44A1Q8WWI5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SLC44A1Q8WWI5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
SLC44A1Q8WWI5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
SLC44A1Q8WWI5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
SLC44A1Q8WWI5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
SLC44A1Q8WWI5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SLC44A1Q8WWI5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.1■■□□□ 1.13
SLC44A1Q8WWI5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.1■■□□□ 1.13
SLC44A1Q8WWI5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
SLC44A1Q8WWI5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
SLC44A1Q8WWI5 LINC01960-201ENST00000563759 1884 ntBASIC22.1■■□□□ 1.13
SLC44A1Q8WWI5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
SLC44A1Q8WWI5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.1■■□□□ 1.13
SLC44A1Q8WWI5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
SLC44A1Q8WWI5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.1■■□□□ 1.13
SLC44A1Q8WWI5 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
SLC44A1Q8WWI5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
SLC44A1Q8WWI5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SLC44A1Q8WWI5 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
SLC44A1Q8WWI5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.09■■□□□ 1.13
SLC44A1Q8WWI5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.09■■□□□ 1.13
SLC44A1Q8WWI5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SLC44A1Q8WWI5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SLC44A1Q8WWI5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SLC44A1Q8WWI5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.09■■□□□ 1.13
SLC44A1Q8WWI5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
SLC44A1Q8WWI5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
SLC44A1Q8WWI5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SLC44A1Q8WWI5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SLC44A1Q8WWI5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SLC44A1Q8WWI5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SLC44A1Q8WWI5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SLC44A1Q8WWI5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SLC44A1Q8WWI5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.08■■□□□ 1.13
SLC44A1Q8WWI5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SLC44A1Q8WWI5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.08■■□□□ 1.13
SLC44A1Q8WWI5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
SLC44A1Q8WWI5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
SLC44A1Q8WWI5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.12
SLC44A1Q8WWI5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.08■■□□□ 1.12
SLC44A1Q8WWI5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.08■■□□□ 1.12
SLC44A1Q8WWI5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.07■■□□□ 1.12
SLC44A1Q8WWI5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.07■■□□□ 1.12
SLC44A1Q8WWI5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC44A1Q8WWI5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
SLC44A1Q8WWI5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC44A1Q8WWI5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.07■■□□□ 1.12
SLC44A1Q8WWI5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.07■■□□□ 1.12
SLC44A1Q8WWI5 DUX4L4-201ENST00000566884 1269 ntBASIC22.07■■□□□ 1.12
SLC44A1Q8WWI5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
SLC44A1Q8WWI5 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.07■■□□□ 1.12
SLC44A1Q8WWI5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.07■■□□□ 1.12
SLC44A1Q8WWI5 AC009086.3-201ENST00000623486 1008 ntBASIC22.07■■□□□ 1.12
SLC44A1Q8WWI5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.07■■□□□ 1.12
SLC44A1Q8WWI5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.07■■□□□ 1.12
SLC44A1Q8WWI5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SLC44A1Q8WWI5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.07■■□□□ 1.12
SLC44A1Q8WWI5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
SLC44A1Q8WWI5 AC010542.4-201ENST00000563151 1910 ntBASIC22.06■■□□□ 1.12
SLC44A1Q8WWI5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.06■■□□□ 1.12
SLC44A1Q8WWI5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SLC44A1Q8WWI5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.06■■□□□ 1.12
SLC44A1Q8WWI5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.06■■□□□ 1.12
SLC44A1Q8WWI5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms