Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
TRBV9A0A0B4J1U6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.53■□□□□ 0.4
TRBV9A0A0B4J1U6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV9A0A0B4J1U6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV9A0A0B4J1U6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRBV9A0A0B4J1U6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV9A0A0B4J1U6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV9A0A0B4J1U6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV9A0A0B4J1U6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV9A0A0B4J1U6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV9A0A0B4J1U6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV9A0A0B4J1U6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV9A0A0B4J1U6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV9A0A0B4J1U6 AC009102.2-201ENST00000606772 1639 ntBASIC17.52■□□□□ 0.4
TRBV9A0A0B4J1U6 AC144652.1-201ENST00000609974 1624 ntBASIC17.52■□□□□ 0.4
TRBV9A0A0B4J1U6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV9A0A0B4J1U6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.52■□□□□ 0.4
TRBV9A0A0B4J1U6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.52■□□□□ 0.4
TRBV9A0A0B4J1U6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.52■□□□□ 0.4
TRBV9A0A0B4J1U6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV9A0A0B4J1U6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.52■□□□□ 0.4
TRBV9A0A0B4J1U6 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.52■□□□□ 0.4
TRBV9A0A0B4J1U6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV9A0A0B4J1U6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.52■□□□□ 0.39
TRBV9A0A0B4J1U6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV9A0A0B4J1U6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV9A0A0B4J1U6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV9A0A0B4J1U6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV9A0A0B4J1U6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV9A0A0B4J1U6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV9A0A0B4J1U6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV9A0A0B4J1U6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV9A0A0B4J1U6 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV9A0A0B4J1U6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
TRBV9A0A0B4J1U6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV9A0A0B4J1U6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV9A0A0B4J1U6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV9A0A0B4J1U6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV9A0A0B4J1U6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV9A0A0B4J1U6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV9A0A0B4J1U6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRBV9A0A0B4J1U6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRBV9A0A0B4J1U6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TRBV9A0A0B4J1U6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.5■□□□□ 0.39
TRBV9A0A0B4J1U6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV9A0A0B4J1U6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV9A0A0B4J1U6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRBV9A0A0B4J1U6 AL356441.2-201ENST00000443009 864 ntBASIC17.5■□□□□ 0.39
TRBV9A0A0B4J1U6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV9A0A0B4J1U6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV9A0A0B4J1U6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV9A0A0B4J1U6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV9A0A0B4J1U6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.5■□□□□ 0.39
TRBV9A0A0B4J1U6 FP325331.1-202ENST00000623531 1380 ntBASIC17.5■□□□□ 0.39
TRBV9A0A0B4J1U6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.5■□□□□ 0.39
TRBV9A0A0B4J1U6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRBV9A0A0B4J1U6 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TRBV9A0A0B4J1U6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.5■□□□□ 0.39
TRBV9A0A0B4J1U6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRBV9A0A0B4J1U6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 MIR3621-201ENST00000580529 85 ntBASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 AL117332.1-201ENST00000622628 974 ntBASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRBV9A0A0B4J1U6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV9A0A0B4J1U6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV9A0A0B4J1U6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV9A0A0B4J1U6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV9A0A0B4J1U6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV9A0A0B4J1U6 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV9A0A0B4J1U6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.48■□□□□ 0.39
TRBV9A0A0B4J1U6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV9A0A0B4J1U6 AL356740.2-201ENST00000601559 647 ntBASIC17.48■□□□□ 0.39
TRBV9A0A0B4J1U6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.48■□□□□ 0.39
TRBV9A0A0B4J1U6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV9A0A0B4J1U6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TRBV9A0A0B4J1U6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV9A0A0B4J1U6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRBV9A0A0B4J1U6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.48■□□□□ 0.39
TRBV9A0A0B4J1U6 C17orf82-201ENST00000623772 1530 ntBASIC17.47■□□□□ 0.39
TRBV9A0A0B4J1U6 AL353803.4-201ENST00000565882 1934 ntBASIC17.47■□□□□ 0.39
TRBV9A0A0B4J1U6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV9A0A0B4J1U6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
TRBV9A0A0B4J1U6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV9A0A0B4J1U6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRBV9A0A0B4J1U6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.47■□□□□ 0.39
TRBV9A0A0B4J1U6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms