Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NANOGQ9H9S0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.01■□□□□ 0.95
NANOGQ9H9S0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.01■□□□□ 0.95
NANOGQ9H9S0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NANOGQ9H9S0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NANOGQ9H9S0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NANOGQ9H9S0 AC144652.1-201ENST00000609974 1624 ntBASIC21■□□□□ 0.95
NANOGQ9H9S0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
NANOGQ9H9S0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
NANOGQ9H9S0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NANOGQ9H9S0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21■□□□□ 0.95
NANOGQ9H9S0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NANOGQ9H9S0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21■□□□□ 0.95
NANOGQ9H9S0 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21■□□□□ 0.95
NANOGQ9H9S0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21■□□□□ 0.95
NANOGQ9H9S0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21■□□□□ 0.95
NANOGQ9H9S0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NANOGQ9H9S0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NANOGQ9H9S0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NANOGQ9H9S0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.99■□□□□ 0.95
NANOGQ9H9S0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.99■□□□□ 0.95
NANOGQ9H9S0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NANOGQ9H9S0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.99■□□□□ 0.95
NANOGQ9H9S0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NANOGQ9H9S0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.98■□□□□ 0.95
NANOGQ9H9S0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
NANOGQ9H9S0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NANOGQ9H9S0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NANOGQ9H9S0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NANOGQ9H9S0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NANOGQ9H9S0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NANOGQ9H9S0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.98■□□□□ 0.95
NANOGQ9H9S0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.97■□□□□ 0.95
NANOGQ9H9S0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NANOGQ9H9S0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NANOGQ9H9S0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NANOGQ9H9S0 BHLHE23-202ENST00000612929 1109 ntBASIC20.97■□□□□ 0.95
NANOGQ9H9S0 PVT1_1.1-201ENST00000615125 194 ntBASIC20.97■□□□□ 0.95
NANOGQ9H9S0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NANOGQ9H9S0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NANOGQ9H9S0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NANOGQ9H9S0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
NANOGQ9H9S0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NANOGQ9H9S0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NANOGQ9H9S0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
NANOGQ9H9S0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NANOGQ9H9S0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NANOGQ9H9S0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.96■□□□□ 0.95
NANOGQ9H9S0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NANOGQ9H9S0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
NANOGQ9H9S0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NANOGQ9H9S0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NANOGQ9H9S0 ABHD17AP5-201ENST00000580133 923 ntBASIC20.96■□□□□ 0.95
NANOGQ9H9S0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.96■□□□□ 0.95
NANOGQ9H9S0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NANOGQ9H9S0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.96■□□□□ 0.95
NANOGQ9H9S0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.96■□□□□ 0.95
NANOGQ9H9S0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NANOGQ9H9S0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.95■□□□□ 0.94
NANOGQ9H9S0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.95■□□□□ 0.94
NANOGQ9H9S0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.95■□□□□ 0.94
NANOGQ9H9S0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.95■□□□□ 0.94
NANOGQ9H9S0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.95■□□□□ 0.94
NANOGQ9H9S0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
NANOGQ9H9S0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
NANOGQ9H9S0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
NANOGQ9H9S0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NANOGQ9H9S0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.94■□□□□ 0.94
NANOGQ9H9S0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NANOGQ9H9S0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
NANOGQ9H9S0 AC074183.2-201ENST00000623112 922 ntBASIC20.94■□□□□ 0.94
NANOGQ9H9S0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.94■□□□□ 0.94
NANOGQ9H9S0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
NANOGQ9H9S0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NANOGQ9H9S0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NANOGQ9H9S0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.94■□□□□ 0.94
NANOGQ9H9S0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
NANOGQ9H9S0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.93■□□□□ 0.94
NANOGQ9H9S0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.93■□□□□ 0.94
NANOGQ9H9S0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
NANOGQ9H9S0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NANOGQ9H9S0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.93■□□□□ 0.94
NANOGQ9H9S0 NTF6A-201ENST00000591175 560 ntBASIC20.93■□□□□ 0.94
NANOGQ9H9S0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
NANOGQ9H9S0 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.93■□□□□ 0.94
NANOGQ9H9S0 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.93■□□□□ 0.94
NANOGQ9H9S0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NANOGQ9H9S0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NANOGQ9H9S0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.93■□□□□ 0.94
NANOGQ9H9S0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NANOGQ9H9S0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.92■□□□□ 0.94
NANOGQ9H9S0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NANOGQ9H9S0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NANOGQ9H9S0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NANOGQ9H9S0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NANOGQ9H9S0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NANOGQ9H9S0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NANOGQ9H9S0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NANOGQ9H9S0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NANOGQ9H9S0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms