Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 AC087623.3-201ENST00000607047 1098 ntBASIC19.47■□□□□ 0.71
RTTNQ86VV8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTTNQ86VV8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTTNQ86VV8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RTTNQ86VV8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTTNQ86VV8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTTNQ86VV8 FP325331.1-202ENST00000623531 1380 ntBASIC19.47■□□□□ 0.71
RTTNQ86VV8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTTNQ86VV8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RTTNQ86VV8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RTTNQ86VV8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RTTNQ86VV8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.46■□□□□ 0.71
RTTNQ86VV8 AC106739.1-201ENST00000617035 715 ntBASIC19.46■□□□□ 0.71
RTTNQ86VV8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RTTNQ86VV8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RTTNQ86VV8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
RTTNQ86VV8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTTNQ86VV8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTTNQ86VV8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.46■□□□□ 0.71
RTTNQ86VV8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RTTNQ86VV8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.46■□□□□ 0.71
RTTNQ86VV8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTTNQ86VV8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RTTNQ86VV8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.45■□□□□ 0.7
RTTNQ86VV8 C1orf229-201ENST00000623686 2258 ntBASIC19.45■□□□□ 0.7
RTTNQ86VV8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTTNQ86VV8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.45■□□□□ 0.7
RTTNQ86VV8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTTNQ86VV8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.45■□□□□ 0.7
RTTNQ86VV8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.45■□□□□ 0.7
RTTNQ86VV8 AL162430.1-201ENST00000480705 870 ntBASIC19.45■□□□□ 0.7
RTTNQ86VV8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTTNQ86VV8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTTNQ86VV8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.45■□□□□ 0.7
RTTNQ86VV8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTTNQ86VV8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RTTNQ86VV8 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTTNQ86VV8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTTNQ86VV8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.44■□□□□ 0.7
RTTNQ86VV8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
RTTNQ86VV8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.44■□□□□ 0.7
RTTNQ86VV8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTTNQ86VV8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RTTNQ86VV8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.44■□□□□ 0.7
RTTNQ86VV8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RTTNQ86VV8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTTNQ86VV8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RTTNQ86VV8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTTNQ86VV8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTTNQ86VV8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTTNQ86VV8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RTTNQ86VV8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.43■□□□□ 0.7
RTTNQ86VV8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTTNQ86VV8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTTNQ86VV8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
RTTNQ86VV8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.43■□□□□ 0.7
RTTNQ86VV8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RTTNQ86VV8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTTNQ86VV8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTTNQ86VV8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RTTNQ86VV8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTTNQ86VV8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.43■□□□□ 0.7
RTTNQ86VV8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.43■□□□□ 0.7
RTTNQ86VV8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.42■□□□□ 0.7
RTTNQ86VV8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.42■□□□□ 0.7
RTTNQ86VV8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
RTTNQ86VV8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTTNQ86VV8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.42■□□□□ 0.7
RTTNQ86VV8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.42■□□□□ 0.7
RTTNQ86VV8 AL353803.4-201ENST00000565882 1934 ntBASIC19.42■□□□□ 0.7
RTTNQ86VV8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.42■□□□□ 0.7
RTTNQ86VV8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTTNQ86VV8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTTNQ86VV8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTTNQ86VV8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.42■□□□□ 0.7
RTTNQ86VV8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RTTNQ86VV8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTTNQ86VV8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTTNQ86VV8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.41■□□□□ 0.7
RTTNQ86VV8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.41■□□□□ 0.7
RTTNQ86VV8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RTTNQ86VV8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTTNQ86VV8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTTNQ86VV8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTTNQ86VV8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.41■□□□□ 0.7
RTTNQ86VV8 AC006455.2-201ENST00000429931 906 ntBASIC19.41■□□□□ 0.7
RTTNQ86VV8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.41■□□□□ 0.7
RTTNQ86VV8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.41■□□□□ 0.7
RTTNQ86VV8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RTTNQ86VV8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RTTNQ86VV8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.41■□□□□ 0.7
RTTNQ86VV8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTTNQ86VV8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.4■□□□□ 0.7
RTTNQ86VV8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RTTNQ86VV8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.4■□□□□ 0.7
RTTNQ86VV8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
RTTNQ86VV8 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTTNQ86VV8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTTNQ86VV8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTTNQ86VV8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms