Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CMC4P56277 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMC4P56277 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMC4P56277 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMC4P56277 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.49■□□□□ 0.23
CMC4P56277 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.49■□□□□ 0.23
CMC4P56277 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC16.49■□□□□ 0.23
CMC4P56277 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CMC4P56277 AL355001.2-201ENST00000620617 1191 ntBASIC16.49■□□□□ 0.23
CMC4P56277 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CMC4P56277 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMC4P56277 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMC4P56277 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.49■□□□□ 0.23
CMC4P56277 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.49■□□□□ 0.23
CMC4P56277 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CMC4P56277 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CMC4P56277 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.48■□□□□ 0.23
CMC4P56277 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
CMC4P56277 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.48■□□□□ 0.23
CMC4P56277 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.48■□□□□ 0.23
CMC4P56277 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CMC4P56277 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CMC4P56277 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CMC4P56277 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CMC4P56277 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CMC4P56277 PKD1P6-201ENST00000343738 4769 ntBASIC16.48■□□□□ 0.23
CMC4P56277 AC024257.2-201ENST00000549699 147 ntBASIC16.48■□□□□ 0.23
CMC4P56277 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CMC4P56277 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.48■□□□□ 0.23
CMC4P56277 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CMC4P56277 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CMC4P56277 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CMC4P56277 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CMC4P56277 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
CMC4P56277 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CMC4P56277 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.47■□□□□ 0.23
CMC4P56277 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CMC4P56277 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CMC4P56277 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.47■□□□□ 0.23
CMC4P56277 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.47■□□□□ 0.23
CMC4P56277 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CMC4P56277 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CMC4P56277 OR2I1P-207ENST00000453522 948 ntBASIC16.47■□□□□ 0.23
CMC4P56277 AC087239.1-201ENST00000622671 572 ntBASIC16.47■□□□□ 0.23
CMC4P56277 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CMC4P56277 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CMC4P56277 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CMC4P56277 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.47■□□□□ 0.23
CMC4P56277 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.47■□□□□ 0.23
CMC4P56277 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CMC4P56277 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CMC4P56277 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CMC4P56277 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.47■□□□□ 0.23
CMC4P56277 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CMC4P56277 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CMC4P56277 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CMC4P56277 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CMC4P56277 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CMC4P56277 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CMC4P56277 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CMC4P56277 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.46■□□□□ 0.23
CMC4P56277 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CMC4P56277 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CMC4P56277 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CMC4P56277 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.46■□□□□ 0.23
CMC4P56277 BX842568.3-201ENST00000418104 571 ntBASIC16.46■□□□□ 0.23
CMC4P56277 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.46■□□□□ 0.23
CMC4P56277 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.46■□□□□ 0.23
CMC4P56277 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.46■□□□□ 0.23
CMC4P56277 AC110285.6-201ENST00000617652 491 ntBASIC16.46■□□□□ 0.23
CMC4P56277 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CMC4P56277 DUSP8P3-201ENST00000399571 1760 ntBASIC16.46■□□□□ 0.22
CMC4P56277 THRA-202ENST00000394121 2260 ntTSL 2 BASIC16.45■□□□□ 0.22
CMC4P56277 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.45■□□□□ 0.22
CMC4P56277 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CMC4P56277 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.45■□□□□ 0.22
CMC4P56277 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CMC4P56277 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CMC4P56277 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.45■□□□□ 0.22
CMC4P56277 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.45■□□□□ 0.22
CMC4P56277 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CMC4P56277 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CMC4P56277 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.45■□□□□ 0.22
CMC4P56277 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CMC4P56277 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CMC4P56277 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CMC4P56277 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.45■□□□□ 0.22
CMC4P56277 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CMC4P56277 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMC4P56277 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CMC4P56277 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CMC4P56277 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CMC4P56277 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CMC4P56277 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.44■□□□□ 0.22
CMC4P56277 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CMC4P56277 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.44■□□□□ 0.22
CMC4P56277 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
CMC4P56277 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.44■□□□□ 0.22
CMC4P56277 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.44■□□□□ 0.22
CMC4P56277 MIR4767-201ENST00000582827 78 ntBASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms