Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1A1P48729 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1A1P48729 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CSNK1A1P48729 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1A1P48729 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1A1P48729 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.67■□□□□ 0.74
CSNK1A1P48729 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.67■□□□□ 0.74
CSNK1A1P48729 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.67■□□□□ 0.74
CSNK1A1P48729 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CSNK1A1P48729 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSNK1A1P48729 AC012676.1-201ENST00000574705 1949 ntBASIC19.66■□□□□ 0.74
CSNK1A1P48729 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1A1P48729 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1A1P48729 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1A1P48729 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1A1P48729 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1A1P48729 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSNK1A1P48729 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1A1P48729 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1A1P48729 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1A1P48729 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CSNK1A1P48729 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.65■□□□□ 0.74
CSNK1A1P48729 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1A1P48729 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1A1P48729 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1A1P48729 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CSNK1A1P48729 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1A1P48729 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.65■□□□□ 0.74
CSNK1A1P48729 AC131281.2-201ENST00000520478 145 ntBASIC19.65■□□□□ 0.74
CSNK1A1P48729 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1A1P48729 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CSNK1A1P48729 AC099791.2-201ENST00000605725 427 ntBASIC19.65■□□□□ 0.74
CSNK1A1P48729 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CSNK1A1P48729 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CSNK1A1P48729 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSNK1A1P48729 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
CSNK1A1P48729 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.65■□□□□ 0.74
CSNK1A1P48729 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.65■□□□□ 0.74
CSNK1A1P48729 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.64■□□□□ 0.74
CSNK1A1P48729 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CSNK1A1P48729 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1A1P48729 AC092171.4-201ENST00000609130 632 ntBASIC19.64■□□□□ 0.73
CSNK1A1P48729 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.64■□□□□ 0.73
CSNK1A1P48729 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSNK1A1P48729 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.64■□□□□ 0.73
CSNK1A1P48729 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.64■□□□□ 0.73
CSNK1A1P48729 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CSNK1A1P48729 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CSNK1A1P48729 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CSNK1A1P48729 AC006455.2-201ENST00000429931 906 ntBASIC19.63■□□□□ 0.73
CSNK1A1P48729 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CSNK1A1P48729 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.63■□□□□ 0.73
CSNK1A1P48729 MIR4466-201ENST00000606121 54 ntBASIC19.63■□□□□ 0.73
CSNK1A1P48729 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1A1P48729 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSNK1A1P48729 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.63■□□□□ 0.73
CSNK1A1P48729 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1A1P48729 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CSNK1A1P48729 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1A1P48729 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1A1P48729 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1A1P48729 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CSNK1A1P48729 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CSNK1A1P48729 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1A1P48729 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CSNK1A1P48729 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.62■□□□□ 0.73
CSNK1A1P48729 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1A1P48729 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1A1P48729 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1A1P48729 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1A1P48729 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1A1P48729 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.62■□□□□ 0.73
CSNK1A1P48729 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1A1P48729 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1A1P48729 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.62■□□□□ 0.73
CSNK1A1P48729 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSNK1A1P48729 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1A1P48729 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1A1P48729 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1A1P48729 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.61■□□□□ 0.73
CSNK1A1P48729 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1A1P48729 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.61■□□□□ 0.73
CSNK1A1P48729 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.61■□□□□ 0.73
CSNK1A1P48729 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.61■□□□□ 0.73
CSNK1A1P48729 AL499627.2-201ENST00000606283 725 ntBASIC19.61■□□□□ 0.73
CSNK1A1P48729 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.61■□□□□ 0.73
CSNK1A1P48729 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1A1P48729 C1orf229-201ENST00000623686 2258 ntBASIC19.61■□□□□ 0.73
CSNK1A1P48729 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.61■□□□□ 0.73
CSNK1A1P48729 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CSNK1A1P48729 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.61■□□□□ 0.73
CSNK1A1P48729 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1A1P48729 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSNK1A1P48729 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1A1P48729 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1A1P48729 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1A1P48729 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CSNK1A1P48729 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1A1P48729 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1A1P48729 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms