Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TRBV5-5A0A0J9YX44 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV5-5A0A0J9YX44 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV5-5A0A0J9YX44 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.27■□□□□ 0.68
TRBV5-5A0A0J9YX44 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.27■□□□□ 0.68
TRBV5-5A0A0J9YX44 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV5-5A0A0J9YX44 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRBV5-5A0A0J9YX44 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRBV5-5A0A0J9YX44 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRBV5-5A0A0J9YX44 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TRBV5-5A0A0J9YX44 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV5-5A0A0J9YX44 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV5-5A0A0J9YX44 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.26■□□□□ 0.67
TRBV5-5A0A0J9YX44 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.26■□□□□ 0.67
TRBV5-5A0A0J9YX44 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV5-5A0A0J9YX44 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV5-5A0A0J9YX44 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV5-5A0A0J9YX44 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.26■□□□□ 0.67
TRBV5-5A0A0J9YX44 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.26■□□□□ 0.67
TRBV5-5A0A0J9YX44 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.26■□□□□ 0.67
TRBV5-5A0A0J9YX44 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRBV5-5A0A0J9YX44 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-5A0A0J9YX44 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.25■□□□□ 0.67
TRBV5-5A0A0J9YX44 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-5A0A0J9YX44 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TRBV5-5A0A0J9YX44 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.25■□□□□ 0.67
TRBV5-5A0A0J9YX44 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-5A0A0J9YX44 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.25■□□□□ 0.67
TRBV5-5A0A0J9YX44 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.25■□□□□ 0.67
TRBV5-5A0A0J9YX44 SNX5-217ENST00000606557 1087 ntBASIC19.25■□□□□ 0.67
TRBV5-5A0A0J9YX44 BHLHE23-202ENST00000612929 1109 ntBASIC19.25■□□□□ 0.67
TRBV5-5A0A0J9YX44 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-5A0A0J9YX44 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-5A0A0J9YX44 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-5A0A0J9YX44 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-5A0A0J9YX44 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-5A0A0J9YX44 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-5A0A0J9YX44 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-5A0A0J9YX44 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-5A0A0J9YX44 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRBV5-5A0A0J9YX44 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-5A0A0J9YX44 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.24■□□□□ 0.67
TRBV5-5A0A0J9YX44 NTF6A-201ENST00000591175 560 ntBASIC19.24■□□□□ 0.67
TRBV5-5A0A0J9YX44 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.24■□□□□ 0.67
TRBV5-5A0A0J9YX44 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-5A0A0J9YX44 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-5A0A0J9YX44 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRBV5-5A0A0J9YX44 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV5-5A0A0J9YX44 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV5-5A0A0J9YX44 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-5A0A0J9YX44 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-5A0A0J9YX44 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-5A0A0J9YX44 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-5A0A0J9YX44 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.22■□□□□ 0.67
TRBV5-5A0A0J9YX44 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.22■□□□□ 0.67
TRBV5-5A0A0J9YX44 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-5A0A0J9YX44 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-5A0A0J9YX44 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.22■□□□□ 0.67
TRBV5-5A0A0J9YX44 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.22■□□□□ 0.67
TRBV5-5A0A0J9YX44 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-5A0A0J9YX44 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-5A0A0J9YX44 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-5A0A0J9YX44 LINC01529-204ENST00000636474 1715 ntBASIC19.22■□□□□ 0.67
TRBV5-5A0A0J9YX44 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.21■□□□□ 0.67
TRBV5-5A0A0J9YX44 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.21■□□□□ 0.67
TRBV5-5A0A0J9YX44 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV5-5A0A0J9YX44 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TRBV5-5A0A0J9YX44 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
TRBV5-5A0A0J9YX44 ABHD17AP5-201ENST00000580133 923 ntBASIC19.21■□□□□ 0.67
TRBV5-5A0A0J9YX44 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV5-5A0A0J9YX44 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV5-5A0A0J9YX44 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.21■□□□□ 0.67
TRBV5-5A0A0J9YX44 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV5-5A0A0J9YX44 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.21■□□□□ 0.67
TRBV5-5A0A0J9YX44 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV5-5A0A0J9YX44 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-5A0A0J9YX44 FP325331.1-202ENST00000623531 1380 ntBASIC19.2■□□□□ 0.66
TRBV5-5A0A0J9YX44 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRBV5-5A0A0J9YX44 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRBV5-5A0A0J9YX44 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-5A0A0J9YX44 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-5A0A0J9YX44 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-5A0A0J9YX44 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.2■□□□□ 0.66
TRBV5-5A0A0J9YX44 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.2■□□□□ 0.66
TRBV5-5A0A0J9YX44 AC004987.1-201ENST00000428627 508 ntBASIC19.2■□□□□ 0.66
TRBV5-5A0A0J9YX44 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TRBV5-5A0A0J9YX44 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-5A0A0J9YX44 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-5A0A0J9YX44 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TRBV5-5A0A0J9YX44 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-5A0A0J9YX44 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV5-5A0A0J9YX44 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV5-5A0A0J9YX44 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRBV5-5A0A0J9YX44 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV5-5A0A0J9YX44 ATP5G2P3-201ENST00000429083 425 ntBASIC19.19■□□□□ 0.66
TRBV5-5A0A0J9YX44 AC010980.1-201ENST00000587192 1142 ntBASIC19.19■□□□□ 0.66
TRBV5-5A0A0J9YX44 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.19■□□□□ 0.66
TRBV5-5A0A0J9YX44 AL024507.2-201ENST00000606070 2574 ntBASIC19.19■□□□□ 0.66
TRBV5-5A0A0J9YX44 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
TRBV5-5A0A0J9YX44 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms