Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CSNK1G3Q9Y6M4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1G3Q9Y6M4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CSNK1G3Q9Y6M4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1G3Q9Y6M4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1G3Q9Y6M4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.78■■□□□ 1.08
CSNK1G3Q9Y6M4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1G3Q9Y6M4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1G3Q9Y6M4 AC012414.1-201ENST00000556676 535 ntBASIC21.78■■□□□ 1.08
CSNK1G3Q9Y6M4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.78■■□□□ 1.08
CSNK1G3Q9Y6M4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.78■■□□□ 1.08
CSNK1G3Q9Y6M4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.78■■□□□ 1.08
CSNK1G3Q9Y6M4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.78■■□□□ 1.08
CSNK1G3Q9Y6M4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1G3Q9Y6M4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.77■■□□□ 1.08
CSNK1G3Q9Y6M4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.77■■□□□ 1.08
CSNK1G3Q9Y6M4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1G3Q9Y6M4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1G3Q9Y6M4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1G3Q9Y6M4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1G3Q9Y6M4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.77■■□□□ 1.08
CSNK1G3Q9Y6M4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
CSNK1G3Q9Y6M4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CSNK1G3Q9Y6M4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CSNK1G3Q9Y6M4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.77■■□□□ 1.07
CSNK1G3Q9Y6M4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.76■■□□□ 1.07
CSNK1G3Q9Y6M4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.76■■□□□ 1.07
CSNK1G3Q9Y6M4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.76■■□□□ 1.07
CSNK1G3Q9Y6M4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1G3Q9Y6M4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1G3Q9Y6M4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1G3Q9Y6M4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CSNK1G3Q9Y6M4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.76■■□□□ 1.07
CSNK1G3Q9Y6M4 AC010525.1-201ENST00000585559 441 ntBASIC21.76■■□□□ 1.07
CSNK1G3Q9Y6M4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1G3Q9Y6M4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1G3Q9Y6M4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1G3Q9Y6M4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CSNK1G3Q9Y6M4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1G3Q9Y6M4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1G3Q9Y6M4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1G3Q9Y6M4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CSNK1G3Q9Y6M4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1G3Q9Y6M4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CSNK1G3Q9Y6M4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1G3Q9Y6M4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.75■■□□□ 1.07
CSNK1G3Q9Y6M4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1G3Q9Y6M4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1G3Q9Y6M4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.75■■□□□ 1.07
CSNK1G3Q9Y6M4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.75■■□□□ 1.07
CSNK1G3Q9Y6M4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CSNK1G3Q9Y6M4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CSNK1G3Q9Y6M4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CSNK1G3Q9Y6M4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1G3Q9Y6M4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
CSNK1G3Q9Y6M4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.74■■□□□ 1.07
CSNK1G3Q9Y6M4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1G3Q9Y6M4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSNK1G3Q9Y6M4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.74■■□□□ 1.07
CSNK1G3Q9Y6M4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.74■■□□□ 1.07
CSNK1G3Q9Y6M4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CSNK1G3Q9Y6M4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CSNK1G3Q9Y6M4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CSNK1G3Q9Y6M4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.73■■□□□ 1.07
CSNK1G3Q9Y6M4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.73■■□□□ 1.07
CSNK1G3Q9Y6M4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.73■■□□□ 1.07
CSNK1G3Q9Y6M4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSNK1G3Q9Y6M4 AL031602.1-201ENST00000633169 911 ntBASIC21.73■■□□□ 1.07
CSNK1G3Q9Y6M4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CSNK1G3Q9Y6M4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 KRT18P5-201ENST00000436075 1291 ntBASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 DUX4L2-201ENST00000561772 1275 ntBASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 DUX4L6-201ENST00000626483 1275 ntBASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 DUX4L1-201ENST00000627662 1275 ntBASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 DUX4L8-201ENST00000629013 1275 ntBASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 DUX4L3-201ENST00000630187 1275 ntBASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 DUX4L7-201ENST00000630678 1275 ntBASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 DUX4L5-201ENST00000630834 1275 ntBASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.72■■□□□ 1.07
CSNK1G3Q9Y6M4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CSNK1G3Q9Y6M4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms