Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHA13Q9Y5I0 AC080038.3-201ENST00000623346 1952 ntBASIC23.79■■□□□ 1.4
PCDHA13Q9Y5I0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
PCDHA13Q9Y5I0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.78■■□□□ 1.4
PCDHA13Q9Y5I0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PCDHA13Q9Y5I0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PCDHA13Q9Y5I0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHA13Q9Y5I0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDHA13Q9Y5I0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDHA13Q9Y5I0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.78■■□□□ 1.4
PCDHA13Q9Y5I0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDHA13Q9Y5I0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDHA13Q9Y5I0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHA13Q9Y5I0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDHA13Q9Y5I0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDHA13Q9Y5I0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PCDHA13Q9Y5I0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHA13Q9Y5I0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHA13Q9Y5I0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHA13Q9Y5I0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHA13Q9Y5I0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHA13Q9Y5I0 AC087742.1-201ENST00000575880 1738 ntBASIC23.77■■□□□ 1.4
PCDHA13Q9Y5I0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHA13Q9Y5I0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHA13Q9Y5I0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHA13Q9Y5I0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
PCDHA13Q9Y5I0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHA13Q9Y5I0 AC144652.1-201ENST00000609974 1624 ntBASIC23.77■■□□□ 1.4
PCDHA13Q9Y5I0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PCDHA13Q9Y5I0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PCDHA13Q9Y5I0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHA13Q9Y5I0 C11orf96-202ENST00000528572 1834 ntBASIC23.76■■□□□ 1.39
PCDHA13Q9Y5I0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.76■■□□□ 1.39
PCDHA13Q9Y5I0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
PCDHA13Q9Y5I0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHA13Q9Y5I0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDHA13Q9Y5I0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA13Q9Y5I0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA13Q9Y5I0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA13Q9Y5I0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PCDHA13Q9Y5I0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHA13Q9Y5I0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA13Q9Y5I0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA13Q9Y5I0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
PCDHA13Q9Y5I0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PCDHA13Q9Y5I0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA13Q9Y5I0 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHA13Q9Y5I0 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHA13Q9Y5I0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA13Q9Y5I0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA13Q9Y5I0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHA13Q9Y5I0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHA13Q9Y5I0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
PCDHA13Q9Y5I0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHA13Q9Y5I0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHA13Q9Y5I0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.74■■□□□ 1.39
PCDHA13Q9Y5I0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHA13Q9Y5I0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHA13Q9Y5I0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PCDHA13Q9Y5I0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHA13Q9Y5I0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PCDHA13Q9Y5I0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHA13Q9Y5I0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHA13Q9Y5I0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDHA13Q9Y5I0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHA13Q9Y5I0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDHA13Q9Y5I0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHA13Q9Y5I0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHA13Q9Y5I0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHA13Q9Y5I0 TSPY13P-201ENST00000338964 914 ntBASIC23.73■■□□□ 1.39
PCDHA13Q9Y5I0 SNX5-217ENST00000606557 1087 ntBASIC23.73■■□□□ 1.39
PCDHA13Q9Y5I0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHA13Q9Y5I0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHA13Q9Y5I0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHA13Q9Y5I0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHA13Q9Y5I0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
PCDHA13Q9Y5I0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.72■■□□□ 1.39
PCDHA13Q9Y5I0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.72■■□□□ 1.39
PCDHA13Q9Y5I0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
PCDHA13Q9Y5I0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHA13Q9Y5I0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHA13Q9Y5I0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHA13Q9Y5I0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA13Q9Y5I0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDHA13Q9Y5I0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
PCDHA13Q9Y5I0 MIR4508-201ENST00000584178 70 ntBASIC23.71■■□□□ 1.39
PCDHA13Q9Y5I0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA13Q9Y5I0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHA13Q9Y5I0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHA13Q9Y5I0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.7■■□□□ 1.39
PCDHA13Q9Y5I0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHA13Q9Y5I0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
PCDHA13Q9Y5I0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.7■■□□□ 1.38
PCDHA13Q9Y5I0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDHA13Q9Y5I0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDHA13Q9Y5I0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA13Q9Y5I0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA13Q9Y5I0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHA13Q9Y5I0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHA13Q9Y5I0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms