Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 RARRES2P2-201ENST00000394842 485 ntBASIC21.18■□□□□ 0.98
NANOGQ9H9S0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NANOGQ9H9S0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NANOGQ9H9S0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
NANOGQ9H9S0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
NANOGQ9H9S0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NANOGQ9H9S0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.17■□□□□ 0.98
NANOGQ9H9S0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NANOGQ9H9S0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NANOGQ9H9S0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.17■□□□□ 0.98
NANOGQ9H9S0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NANOGQ9H9S0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.17■□□□□ 0.98
NANOGQ9H9S0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NANOGQ9H9S0 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NANOGQ9H9S0 AC139530.1-201ENST00000575312 1977 ntBASIC21.17■□□□□ 0.98
NANOGQ9H9S0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.17■□□□□ 0.98
NANOGQ9H9S0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.17■□□□□ 0.98
NANOGQ9H9S0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NANOGQ9H9S0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
NANOGQ9H9S0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NANOGQ9H9S0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.16■□□□□ 0.98
NANOGQ9H9S0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.16■□□□□ 0.98
NANOGQ9H9S0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.16■□□□□ 0.98
NANOGQ9H9S0 KRT18P60-201ENST00000312876 1297 ntBASIC21.16■□□□□ 0.98
NANOGQ9H9S0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NANOGQ9H9S0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NANOGQ9H9S0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.16■□□□□ 0.98
NANOGQ9H9S0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.16■□□□□ 0.98
NANOGQ9H9S0 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NANOGQ9H9S0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.16■□□□□ 0.98
NANOGQ9H9S0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.16■□□□□ 0.98
NANOGQ9H9S0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.15■□□□□ 0.98
NANOGQ9H9S0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NANOGQ9H9S0 AF131216.4-201ENST00000638924 1588 ntBASIC21.15■□□□□ 0.98
NANOGQ9H9S0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.15■□□□□ 0.98
NANOGQ9H9S0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NANOGQ9H9S0 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NANOGQ9H9S0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NANOGQ9H9S0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.15■□□□□ 0.98
NANOGQ9H9S0 HSD17B1P1-201ENST00000590052 955 ntBASIC21.15■□□□□ 0.98
NANOGQ9H9S0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NANOGQ9H9S0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
NANOGQ9H9S0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.14■□□□□ 0.97
NANOGQ9H9S0 AC092053.2-201ENST00000640557 1818 ntBASIC21.14■□□□□ 0.97
NANOGQ9H9S0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
NANOGQ9H9S0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.14■□□□□ 0.97
NANOGQ9H9S0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NANOGQ9H9S0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.14■□□□□ 0.97
NANOGQ9H9S0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NANOGQ9H9S0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NANOGQ9H9S0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.13■□□□□ 0.97
NANOGQ9H9S0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NANOGQ9H9S0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NANOGQ9H9S0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NANOGQ9H9S0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
NANOGQ9H9S0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NANOGQ9H9S0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NANOGQ9H9S0 AC120024.1-201ENST00000562672 995 ntBASIC21.13■□□□□ 0.97
NANOGQ9H9S0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NANOGQ9H9S0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
NANOGQ9H9S0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.13■□□□□ 0.97
NANOGQ9H9S0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NANOGQ9H9S0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NANOGQ9H9S0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NANOGQ9H9S0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
NANOGQ9H9S0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NANOGQ9H9S0 AC004448.1-201ENST00000458332 883 ntBASIC21.12■□□□□ 0.97
NANOGQ9H9S0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NANOGQ9H9S0 C11orf96-202ENST00000528572 1834 ntBASIC21.12■□□□□ 0.97
NANOGQ9H9S0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NANOGQ9H9S0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.12■□□□□ 0.97
NANOGQ9H9S0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
NANOGQ9H9S0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.11■□□□□ 0.97
NANOGQ9H9S0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NANOGQ9H9S0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NANOGQ9H9S0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NANOGQ9H9S0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.11■□□□□ 0.97
NANOGQ9H9S0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NANOGQ9H9S0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NANOGQ9H9S0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NANOGQ9H9S0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NANOGQ9H9S0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NANOGQ9H9S0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NANOGQ9H9S0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.11■□□□□ 0.97
NANOGQ9H9S0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NANOGQ9H9S0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NANOGQ9H9S0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NANOGQ9H9S0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NANOGQ9H9S0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.1■□□□□ 0.97
NANOGQ9H9S0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NANOGQ9H9S0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NANOGQ9H9S0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NANOGQ9H9S0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NANOGQ9H9S0 AC139795.1-202ENST00000500444 432 ntBASIC21.1■□□□□ 0.97
NANOGQ9H9S0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NANOGQ9H9S0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NANOGQ9H9S0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NANOGQ9H9S0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NANOGQ9H9S0 AC080038.3-201ENST00000623346 1952 ntBASIC21.1■□□□□ 0.97
NANOGQ9H9S0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms