Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC44A1Q8WWI5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC44A1Q8WWI5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SLC44A1Q8WWI5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SLC44A1Q8WWI5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
SLC44A1Q8WWI5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SLC44A1Q8WWI5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC44A1Q8WWI5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC44A1Q8WWI5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC44A1Q8WWI5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC44A1Q8WWI5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC44A1Q8WWI5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
SLC44A1Q8WWI5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.4■■□□□ 1.18
SLC44A1Q8WWI5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
SLC44A1Q8WWI5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.4■■□□□ 1.18
SLC44A1Q8WWI5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.4■■□□□ 1.18
SLC44A1Q8WWI5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.4■■□□□ 1.18
SLC44A1Q8WWI5 ABHD17AP5-201ENST00000580133 923 ntBASIC22.4■■□□□ 1.18
SLC44A1Q8WWI5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.4■■□□□ 1.18
SLC44A1Q8WWI5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC44A1Q8WWI5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SLC44A1Q8WWI5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.4■■□□□ 1.18
SLC44A1Q8WWI5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC44A1Q8WWI5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.39■■□□□ 1.18
SLC44A1Q8WWI5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SLC44A1Q8WWI5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SLC44A1Q8WWI5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SLC44A1Q8WWI5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.39■■□□□ 1.17
SLC44A1Q8WWI5 AC074183.2-201ENST00000623112 922 ntBASIC22.39■■□□□ 1.17
SLC44A1Q8WWI5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.39■■□□□ 1.17
SLC44A1Q8WWI5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.39■■□□□ 1.17
SLC44A1Q8WWI5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SLC44A1Q8WWI5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLC44A1Q8WWI5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLC44A1Q8WWI5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
SLC44A1Q8WWI5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SLC44A1Q8WWI5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.38■■□□□ 1.17
SLC44A1Q8WWI5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SLC44A1Q8WWI5 BHLHE23-202ENST00000612929 1109 ntBASIC22.38■■□□□ 1.17
SLC44A1Q8WWI5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLC44A1Q8WWI5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLC44A1Q8WWI5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.38■■□□□ 1.17
SLC44A1Q8WWI5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SLC44A1Q8WWI5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
SLC44A1Q8WWI5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.38■■□□□ 1.17
SLC44A1Q8WWI5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLC44A1Q8WWI5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.37■■□□□ 1.17
SLC44A1Q8WWI5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SLC44A1Q8WWI5 AC092053.2-201ENST00000640557 1818 ntBASIC22.37■■□□□ 1.17
SLC44A1Q8WWI5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
SLC44A1Q8WWI5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
SLC44A1Q8WWI5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.36■■□□□ 1.17
SLC44A1Q8WWI5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC44A1Q8WWI5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
SLC44A1Q8WWI5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.36■■□□□ 1.17
SLC44A1Q8WWI5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC44A1Q8WWI5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC44A1Q8WWI5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC44A1Q8WWI5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SLC44A1Q8WWI5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 AC007375.3-201ENST00000600936 2314 ntBASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 AC080038.3-201ENST00000623346 1952 ntBASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
SLC44A1Q8WWI5 AC087742.1-201ENST00000575880 1738 ntBASIC22.34■■□□□ 1.17
SLC44A1Q8WWI5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SLC44A1Q8WWI5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SLC44A1Q8WWI5 AC004987.1-201ENST00000428627 508 ntBASIC22.34■■□□□ 1.17
SLC44A1Q8WWI5 ATP5G2P3-201ENST00000429083 425 ntBASIC22.34■■□□□ 1.17
SLC44A1Q8WWI5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.34■■□□□ 1.17
SLC44A1Q8WWI5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.34■■□□□ 1.17
SLC44A1Q8WWI5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SLC44A1Q8WWI5 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
SLC44A1Q8WWI5 AC144652.1-201ENST00000609974 1624 ntBASIC22.34■■□□□ 1.17
SLC44A1Q8WWI5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.34■■□□□ 1.17
SLC44A1Q8WWI5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SLC44A1Q8WWI5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
SLC44A1Q8WWI5 C11orf96-202ENST00000528572 1834 ntBASIC22.34■■□□□ 1.17
SLC44A1Q8WWI5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.33■■□□□ 1.17
SLC44A1Q8WWI5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SLC44A1Q8WWI5 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.33■■□□□ 1.17
SLC44A1Q8WWI5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SLC44A1Q8WWI5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SLC44A1Q8WWI5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SLC44A1Q8WWI5 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms