Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 AC126544.1-201ENST00000580842 1059 ntBASIC21.32■■□□□ 1
CARFQ8N187 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.32■■□□□ 1
CARFQ8N187 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CARFQ8N187 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CARFQ8N187 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CARFQ8N187 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CARFQ8N187 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.32■■□□□ 1
CARFQ8N187 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CARFQ8N187 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CARFQ8N187 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
CARFQ8N187 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CARFQ8N187 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.31■■□□□ 1
CARFQ8N187 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CARFQ8N187 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CARFQ8N187 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
CARFQ8N187 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CARFQ8N187 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.3■■□□□ 1
CARFQ8N187 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.3■■□□□ 1
CARFQ8N187 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CARFQ8N187 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.3■■□□□ 1
CARFQ8N187 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CARFQ8N187 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.3■■□□□ 1
CARFQ8N187 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.3■■□□□ 1
CARFQ8N187 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.29■■□□□ 1
CARFQ8N187 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.29■■□□□ 1
CARFQ8N187 AC079630.1-202ENST00000618127 1840 ntBASIC21.29■■□□□ 1
CARFQ8N187 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CARFQ8N187 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CARFQ8N187 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CARFQ8N187 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.29■■□□□ 1
CARFQ8N187 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CARFQ8N187 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CARFQ8N187 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.29■■□□□ 1
CARFQ8N187 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.29■■□□□ 1
CARFQ8N187 IGHV3-19-201ENST00000521488 291 ntBASIC21.29■■□□□ 1
CARFQ8N187 AP005435.1-201ENST00000529293 1178 ntBASIC21.29■■□□□ 1
CARFQ8N187 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.29■■□□□ 1
CARFQ8N187 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.29■■□□□ 1
CARFQ8N187 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CARFQ8N187 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.29■■□□□ 1
CARFQ8N187 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.29■■□□□ 1
CARFQ8N187 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CARFQ8N187 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CARFQ8N187 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CARFQ8N187 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CARFQ8N187 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CARFQ8N187 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.28■■□□□ 1
CARFQ8N187 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.28■■□□□ 1
CARFQ8N187 RARRES2P6-201ENST00000567333 442 ntBASIC21.28■■□□□ 1
CARFQ8N187 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.28■■□□□ 1
CARFQ8N187 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.28■■□□□ 1
CARFQ8N187 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.28■■□□□ 1
CARFQ8N187 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CARFQ8N187 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.27■■□□□ 1
CARFQ8N187 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.27■■□□□ 1
CARFQ8N187 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CARFQ8N187 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CARFQ8N187 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.27■■□□□ 1
CARFQ8N187 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CARFQ8N187 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
CARFQ8N187 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.27■■□□□ 1
CARFQ8N187 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CARFQ8N187 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.27■■□□□ 1
CARFQ8N187 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.27■■□□□ 1
CARFQ8N187 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CARFQ8N187 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CARFQ8N187 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CARFQ8N187 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.26■□□□□ 0.99
CARFQ8N187 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.26■□□□□ 0.99
CARFQ8N187 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CARFQ8N187 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CARFQ8N187 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CARFQ8N187 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.26■□□□□ 0.99
CARFQ8N187 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CARFQ8N187 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CARFQ8N187 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CARFQ8N187 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CARFQ8N187 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.25■□□□□ 0.99
CARFQ8N187 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CARFQ8N187 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CARFQ8N187 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.25■□□□□ 0.99
CARFQ8N187 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CARFQ8N187 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CARFQ8N187 ABCB10P4-201ENST00000566803 2184 ntBASIC21.24■□□□□ 0.99
CARFQ8N187 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.24■□□□□ 0.99
CARFQ8N187 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CARFQ8N187 AC068587.7-201ENST00000641602 218 ntBASIC21.24■□□□□ 0.99
CARFQ8N187 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CARFQ8N187 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CARFQ8N187 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CARFQ8N187 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CARFQ8N187 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CARFQ8N187 AC026271.2-201ENST00000428091 497 ntBASIC21.23■□□□□ 0.99
CARFQ8N187 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.23■□□□□ 0.99
CARFQ8N187 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CARFQ8N187 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CARFQ8N187 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.23■□□□□ 0.99
CARFQ8N187 TSPY26P-201ENST00000476365 1326 ntBASIC21.23■□□□□ 0.99
CARFQ8N187 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CARFQ8N187 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms