Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 AC019069.1-201ENST00000610008 1333 ntBASIC23.77■■□□□ 1.4
LIMS2Q7Z4I7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LIMS2Q7Z4I7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
LIMS2Q7Z4I7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
LIMS2Q7Z4I7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
LIMS2Q7Z4I7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LIMS2Q7Z4I7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.76■■□□□ 1.39
LIMS2Q7Z4I7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.76■■□□□ 1.39
LIMS2Q7Z4I7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
LIMS2Q7Z4I7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
LIMS2Q7Z4I7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
LIMS2Q7Z4I7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.76■■□□□ 1.39
LIMS2Q7Z4I7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LIMS2Q7Z4I7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
LIMS2Q7Z4I7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LIMS2Q7Z4I7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LIMS2Q7Z4I7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LIMS2Q7Z4I7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.75■■□□□ 1.39
LIMS2Q7Z4I7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.75■■□□□ 1.39
LIMS2Q7Z4I7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.75■■□□□ 1.39
LIMS2Q7Z4I7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LIMS2Q7Z4I7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.75■■□□□ 1.39
LIMS2Q7Z4I7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LIMS2Q7Z4I7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
LIMS2Q7Z4I7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
LIMS2Q7Z4I7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.74■■□□□ 1.39
LIMS2Q7Z4I7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.74■■□□□ 1.39
LIMS2Q7Z4I7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.74■■□□□ 1.39
LIMS2Q7Z4I7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.74■■□□□ 1.39
LIMS2Q7Z4I7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LIMS2Q7Z4I7 AF213884.3-201ENST00000563833 479 ntBASIC23.74■■□□□ 1.39
LIMS2Q7Z4I7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.74■■□□□ 1.39
LIMS2Q7Z4I7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
LIMS2Q7Z4I7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
LIMS2Q7Z4I7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.74■■□□□ 1.39
LIMS2Q7Z4I7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LIMS2Q7Z4I7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.73■■□□□ 1.39
LIMS2Q7Z4I7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LIMS2Q7Z4I7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LIMS2Q7Z4I7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.73■■□□□ 1.39
LIMS2Q7Z4I7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
LIMS2Q7Z4I7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.73■■□□□ 1.39
LIMS2Q7Z4I7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
LIMS2Q7Z4I7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
LIMS2Q7Z4I7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LIMS2Q7Z4I7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LIMS2Q7Z4I7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LIMS2Q7Z4I7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LIMS2Q7Z4I7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LIMS2Q7Z4I7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LIMS2Q7Z4I7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.72■■□□□ 1.39
LIMS2Q7Z4I7 BX842568.3-201ENST00000418104 571 ntBASIC23.72■■□□□ 1.39
LIMS2Q7Z4I7 AC142381.2-201ENST00000566120 298 ntBASIC23.72■■□□□ 1.39
LIMS2Q7Z4I7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
LIMS2Q7Z4I7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LIMS2Q7Z4I7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
LIMS2Q7Z4I7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
LIMS2Q7Z4I7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LIMS2Q7Z4I7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
LIMS2Q7Z4I7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.71■■□□□ 1.39
LIMS2Q7Z4I7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
LIMS2Q7Z4I7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.71■■□□□ 1.39
LIMS2Q7Z4I7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.71■■□□□ 1.39
LIMS2Q7Z4I7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.71■■□□□ 1.39
LIMS2Q7Z4I7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.71■■□□□ 1.39
LIMS2Q7Z4I7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.7■■□□□ 1.39
LIMS2Q7Z4I7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.7■■□□□ 1.39
LIMS2Q7Z4I7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LIMS2Q7Z4I7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LIMS2Q7Z4I7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
LIMS2Q7Z4I7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LIMS2Q7Z4I7 OR2I1P-207ENST00000453522 948 ntBASIC23.7■■□□□ 1.38
LIMS2Q7Z4I7 AC091305.1-201ENST00000479476 895 ntBASIC23.7■■□□□ 1.38
LIMS2Q7Z4I7 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.7■■□□□ 1.38
LIMS2Q7Z4I7 AC233992.3-201ENST00000607491 485 ntBASIC23.7■■□□□ 1.38
LIMS2Q7Z4I7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
LIMS2Q7Z4I7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LIMS2Q7Z4I7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.7■■□□□ 1.38
LIMS2Q7Z4I7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LIMS2Q7Z4I7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LIMS2Q7Z4I7 RASA4CP-201ENST00000424092 1398 ntBASIC23.69■■□□□ 1.38
LIMS2Q7Z4I7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
LIMS2Q7Z4I7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.69■■□□□ 1.38
LIMS2Q7Z4I7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
LIMS2Q7Z4I7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.69■■□□□ 1.38
LIMS2Q7Z4I7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LIMS2Q7Z4I7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LIMS2Q7Z4I7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LIMS2Q7Z4I7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
LIMS2Q7Z4I7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
LIMS2Q7Z4I7 SLC47A1P1-202ENST00000449666 945 ntBASIC23.68■■□□□ 1.38
LIMS2Q7Z4I7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
LIMS2Q7Z4I7 AC027682.1-201ENST00000562846 899 ntBASIC23.68■■□□□ 1.38
LIMS2Q7Z4I7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
LIMS2Q7Z4I7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.68■■□□□ 1.38
LIMS2Q7Z4I7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
LIMS2Q7Z4I7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.67■■□□□ 1.38
LIMS2Q7Z4I7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
LIMS2Q7Z4I7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
LIMS2Q7Z4I7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms