Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SLC6A12P48065 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC6A12P48065 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A12P48065 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC6A12P48065 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
SLC6A12P48065 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A12P48065 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
SLC6A12P48065 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC6A12P48065 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A12P48065 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC6A12P48065 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC6A12P48065 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A12P48065 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SLC6A12P48065 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A12P48065 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A12P48065 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SLC6A12P48065 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.6■■□□□ 1.05
SLC6A12P48065 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC6A12P48065 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC6A12P48065 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A12P48065 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A12P48065 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SLC6A12P48065 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC6A12P48065 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC6A12P48065 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC6A12P48065 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC6A12P48065 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
SLC6A12P48065 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SLC6A12P48065 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC6A12P48065 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
SLC6A12P48065 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.59■■□□□ 1.05
SLC6A12P48065 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.59■■□□□ 1.05
SLC6A12P48065 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.59■■□□□ 1.05
SLC6A12P48065 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SLC6A12P48065 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC6A12P48065 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC6A12P48065 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.58■■□□□ 1.05
SLC6A12P48065 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.58■■□□□ 1.05
SLC6A12P48065 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC6A12P48065 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.58■■□□□ 1.05
SLC6A12P48065 AL117332.1-201ENST00000622628 974 ntBASIC21.58■■□□□ 1.05
SLC6A12P48065 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A12P48065 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A12P48065 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A12P48065 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A12P48065 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
SLC6A12P48065 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SLC6A12P48065 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.57■■□□□ 1.04
SLC6A12P48065 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SLC6A12P48065 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A12P48065 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SLC6A12P48065 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.57■■□□□ 1.04
SLC6A12P48065 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.57■■□□□ 1.04
SLC6A12P48065 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SLC6A12P48065 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.56■■□□□ 1.04
SLC6A12P48065 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.56■■□□□ 1.04
SLC6A12P48065 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A12P48065 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A12P48065 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A12P48065 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A12P48065 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A12P48065 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A12P48065 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SLC6A12P48065 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SLC6A12P48065 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A12P48065 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A12P48065 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A12P48065 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A12P48065 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A12P48065 MIR3621-201ENST00000580529 85 ntBASIC21.55■■□□□ 1.04
SLC6A12P48065 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A12P48065 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A12P48065 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A12P48065 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SLC6A12P48065 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.55■■□□□ 1.04
SLC6A12P48065 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC6A12P48065 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SLC6A12P48065 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SLC6A12P48065 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.53■■□□□ 1.04
SLC6A12P48065 AC233723.2-201ENST00000623798 2106 ntBASIC21.53■■□□□ 1.04
SLC6A12P48065 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A12P48065 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A12P48065 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A12P48065 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A12P48065 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.53■■□□□ 1.04
SLC6A12P48065 AL356441.2-201ENST00000443009 864 ntBASIC21.53■■□□□ 1.04
SLC6A12P48065 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SLC6A12P48065 AL356740.2-201ENST00000601559 647 ntBASIC21.53■■□□□ 1.04
SLC6A12P48065 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.53■■□□□ 1.04
SLC6A12P48065 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A12P48065 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.53■■□□□ 1.04
SLC6A12P48065 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A12P48065 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A12P48065 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SLC6A12P48065 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
SLC6A12P48065 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SLC6A12P48065 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SLC6A12P48065 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A12P48065 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SLC6A12P48065 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms