Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SNX3O60493 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SNX3O60493 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.04■■□□□ 1.12
SNX3O60493 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SNX3O60493 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SNX3O60493 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.04■■□□□ 1.12
SNX3O60493 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SNX3O60493 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SNX3O60493 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.04■■□□□ 1.12
SNX3O60493 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SNX3O60493 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.03■■□□□ 1.12
SNX3O60493 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC22.03■■□□□ 1.12
SNX3O60493 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SNX3O60493 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.03■■□□□ 1.12
SNX3O60493 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
SNX3O60493 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SNX3O60493 AC005229.4-201ENST00000610085 2198 ntBASIC22.03■■□□□ 1.12
SNX3O60493 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SNX3O60493 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SNX3O60493 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SNX3O60493 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SNX3O60493 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
SNX3O60493 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SNX3O60493 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.02■■□□□ 1.12
SNX3O60493 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SNX3O60493 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.02■■□□□ 1.12
SNX3O60493 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SNX3O60493 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SNX3O60493 CR559946.2-201ENST00000623684 991 ntBASIC22.02■■□□□ 1.12
SNX3O60493 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SNX3O60493 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SNX3O60493 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SNX3O60493 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SNX3O60493 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SNX3O60493 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SNX3O60493 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SNX3O60493 AC092296.2-201ENST00000589470 999 ntBASIC22.01■■□□□ 1.11
SNX3O60493 AC010542.4-201ENST00000563151 1910 ntBASIC22.01■■□□□ 1.11
SNX3O60493 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.01■■□□□ 1.11
SNX3O60493 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SNX3O60493 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SNX3O60493 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SNX3O60493 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SNX3O60493 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22■■□□□ 1.11
SNX3O60493 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22■■□□□ 1.11
SNX3O60493 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SNX3O60493 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22■■□□□ 1.11
SNX3O60493 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22■■□□□ 1.11
SNX3O60493 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC22■■□□□ 1.11
SNX3O60493 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22■■□□□ 1.11
SNX3O60493 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SNX3O60493 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SNX3O60493 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SNX3O60493 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.99■■□□□ 1.11
SNX3O60493 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SNX3O60493 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
SNX3O60493 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.99■■□□□ 1.11
SNX3O60493 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
SNX3O60493 AC087742.1-201ENST00000575880 1738 ntBASIC21.99■■□□□ 1.11
SNX3O60493 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.99■■□□□ 1.11
SNX3O60493 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SNX3O60493 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
SNX3O60493 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
SNX3O60493 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.98■■□□□ 1.11
SNX3O60493 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNX3O60493 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SNX3O60493 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.98■■□□□ 1.11
SNX3O60493 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
SNX3O60493 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SNX3O60493 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNX3O60493 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNX3O60493 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.97■■□□□ 1.11
SNX3O60493 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNX3O60493 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.97■■□□□ 1.11
SNX3O60493 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNX3O60493 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SNX3O60493 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SNX3O60493 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNX3O60493 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNX3O60493 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.97■■□□□ 1.11
SNX3O60493 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNX3O60493 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SNX3O60493 PKD1P6-201ENST00000343738 4769 ntBASIC21.96■■□□□ 1.11
SNX3O60493 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SNX3O60493 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SNX3O60493 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SNX3O60493 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SNX3O60493 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SNX3O60493 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.96■■□□□ 1.11
SNX3O60493 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNX3O60493 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNX3O60493 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNX3O60493 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNX3O60493 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SNX3O60493 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SNX3O60493 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNX3O60493 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNX3O60493 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.95■■□□□ 1.1
SNX3O60493 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNX3O60493 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms