Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ITM2AO43736 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ITM2AO43736 AC080038.3-201ENST00000623346 1952 ntBASIC21.92■■□□□ 1.1
ITM2AO43736 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ITM2AO43736 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ITM2AO43736 AF131216.4-201ENST00000638924 1588 ntBASIC21.92■■□□□ 1.1
ITM2AO43736 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ITM2AO43736 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ITM2AO43736 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.92■■□□□ 1.1
ITM2AO43736 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ITM2AO43736 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ITM2AO43736 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ITM2AO43736 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.92■■□□□ 1.1
ITM2AO43736 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ITM2AO43736 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
ITM2AO43736 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ITM2AO43736 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
ITM2AO43736 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ITM2AO43736 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.91■■□□□ 1.1
ITM2AO43736 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ITM2AO43736 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ITM2AO43736 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
ITM2AO43736 RARRES2P2-201ENST00000394842 485 ntBASIC21.9■■□□□ 1.1
ITM2AO43736 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ITM2AO43736 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ITM2AO43736 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ITM2AO43736 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
ITM2AO43736 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
ITM2AO43736 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
ITM2AO43736 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.89■■□□□ 1.1
ITM2AO43736 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
ITM2AO43736 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ITM2AO43736 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.89■■□□□ 1.09
ITM2AO43736 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
ITM2AO43736 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
ITM2AO43736 AC120024.1-201ENST00000562672 995 ntBASIC21.89■■□□□ 1.09
ITM2AO43736 AC019171.1-201ENST00000601251 1056 ntBASIC21.89■■□□□ 1.09
ITM2AO43736 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
ITM2AO43736 C11orf96-202ENST00000528572 1834 ntBASIC21.89■■□□□ 1.09
ITM2AO43736 AC092053.2-201ENST00000640557 1818 ntBASIC21.89■■□□□ 1.09
ITM2AO43736 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ITM2AO43736 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ITM2AO43736 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ITM2AO43736 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.88■■□□□ 1.09
ITM2AO43736 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
ITM2AO43736 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ITM2AO43736 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
ITM2AO43736 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ITM2AO43736 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.88■■□□□ 1.09
ITM2AO43736 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ITM2AO43736 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.88■■□□□ 1.09
ITM2AO43736 AC022616.5-201ENST00000518796 181 ntBASIC21.88■■□□□ 1.09
ITM2AO43736 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.88■■□□□ 1.09
ITM2AO43736 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.88■■□□□ 1.09
ITM2AO43736 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
ITM2AO43736 AL024507.2-201ENST00000606070 2574 ntBASIC21.88■■□□□ 1.09
ITM2AO43736 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.87■■□□□ 1.09
ITM2AO43736 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.87■■□□□ 1.09
ITM2AO43736 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.87■■□□□ 1.09
ITM2AO43736 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.87■■□□□ 1.09
ITM2AO43736 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.87■■□□□ 1.09
ITM2AO43736 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ITM2AO43736 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ITM2AO43736 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
ITM2AO43736 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.86■■□□□ 1.09
ITM2AO43736 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.86■■□□□ 1.09
ITM2AO43736 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.86■■□□□ 1.09
ITM2AO43736 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ITM2AO43736 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.86■■□□□ 1.09
ITM2AO43736 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
ITM2AO43736 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ITM2AO43736 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
ITM2AO43736 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ITM2AO43736 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
ITM2AO43736 DUX4L18-201ENST00000553347 1267 ntBASIC21.85■■□□□ 1.09
ITM2AO43736 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ITM2AO43736 AC087742.1-201ENST00000575880 1738 ntBASIC21.85■■□□□ 1.09
ITM2AO43736 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
ITM2AO43736 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.85■■□□□ 1.09
ITM2AO43736 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
ITM2AO43736 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ITM2AO43736 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
ITM2AO43736 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
ITM2AO43736 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ITM2AO43736 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ITM2AO43736 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ITM2AO43736 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
ITM2AO43736 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.84■■□□□ 1.09
ITM2AO43736 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.84■■□□□ 1.09
ITM2AO43736 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ITM2AO43736 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.84■■□□□ 1.09
ITM2AO43736 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
ITM2AO43736 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ITM2AO43736 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ITM2AO43736 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
ITM2AO43736 AC004448.1-201ENST00000458332 883 ntBASIC21.83■■□□□ 1.09
ITM2AO43736 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.83■■□□□ 1.09
ITM2AO43736 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.83■■□□□ 1.09
ITM2AO43736 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.83■■□□□ 1.09
ITM2AO43736 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms