Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SAA2-SAA4A0A096LPE2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.23■□□□□ 0.51
SAA2-SAA4A0A096LPE2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SAA2-SAA4A0A096LPE2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.23■□□□□ 0.51
SAA2-SAA4A0A096LPE2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SAA2-SAA4A0A096LPE2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SAA2-SAA4A0A096LPE2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SAA2-SAA4A0A096LPE2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SAA2-SAA4A0A096LPE2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SAA2-SAA4A0A096LPE2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SAA2-SAA4A0A096LPE2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.23■□□□□ 0.51
SAA2-SAA4A0A096LPE2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SAA2-SAA4A0A096LPE2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.23■□□□□ 0.51
SAA2-SAA4A0A096LPE2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SAA2-SAA4A0A096LPE2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.22■□□□□ 0.51
SAA2-SAA4A0A096LPE2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.22■□□□□ 0.51
SAA2-SAA4A0A096LPE2 AC233723.2-201ENST00000623798 2106 ntBASIC18.22■□□□□ 0.51
SAA2-SAA4A0A096LPE2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SAA2-SAA4A0A096LPE2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SAA2-SAA4A0A096LPE2 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.22■□□□□ 0.51
SAA2-SAA4A0A096LPE2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.22■□□□□ 0.51
SAA2-SAA4A0A096LPE2 AC010997.5-201ENST00000609182 354 ntBASIC18.22■□□□□ 0.51
SAA2-SAA4A0A096LPE2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SAA2-SAA4A0A096LPE2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.22■□□□□ 0.51
SAA2-SAA4A0A096LPE2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SAA2-SAA4A0A096LPE2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SAA2-SAA4A0A096LPE2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SAA2-SAA4A0A096LPE2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SAA2-SAA4A0A096LPE2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SAA2-SAA4A0A096LPE2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SAA2-SAA4A0A096LPE2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SAA2-SAA4A0A096LPE2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SAA2-SAA4A0A096LPE2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SAA2-SAA4A0A096LPE2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SAA2-SAA4A0A096LPE2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SAA2-SAA4A0A096LPE2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SAA2-SAA4A0A096LPE2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.21■□□□□ 0.51
SAA2-SAA4A0A096LPE2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SAA2-SAA4A0A096LPE2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.21■□□□□ 0.51
SAA2-SAA4A0A096LPE2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.21■□□□□ 0.51
SAA2-SAA4A0A096LPE2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SAA2-SAA4A0A096LPE2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SAA2-SAA4A0A096LPE2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SAA2-SAA4A0A096LPE2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.2■□□□□ 0.5
SAA2-SAA4A0A096LPE2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SAA2-SAA4A0A096LPE2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SAA2-SAA4A0A096LPE2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.2■□□□□ 0.5
SAA2-SAA4A0A096LPE2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SAA2-SAA4A0A096LPE2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SAA2-SAA4A0A096LPE2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SAA2-SAA4A0A096LPE2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SAA2-SAA4A0A096LPE2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAA2-SAA4A0A096LPE2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAA2-SAA4A0A096LPE2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAA2-SAA4A0A096LPE2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAA2-SAA4A0A096LPE2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.19■□□□□ 0.5
SAA2-SAA4A0A096LPE2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAA2-SAA4A0A096LPE2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAA2-SAA4A0A096LPE2 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.19■□□□□ 0.5
SAA2-SAA4A0A096LPE2 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SAA2-SAA4A0A096LPE2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.19■□□□□ 0.5
SAA2-SAA4A0A096LPE2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SAA2-SAA4A0A096LPE2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.19■□□□□ 0.5
SAA2-SAA4A0A096LPE2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SAA2-SAA4A0A096LPE2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAA2-SAA4A0A096LPE2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.18■□□□□ 0.5
SAA2-SAA4A0A096LPE2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.18■□□□□ 0.5
SAA2-SAA4A0A096LPE2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SAA2-SAA4A0A096LPE2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.18■□□□□ 0.5
SAA2-SAA4A0A096LPE2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAA2-SAA4A0A096LPE2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAA2-SAA4A0A096LPE2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.18■□□□□ 0.5
SAA2-SAA4A0A096LPE2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SAA2-SAA4A0A096LPE2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SAA2-SAA4A0A096LPE2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.18■□□□□ 0.5
SAA2-SAA4A0A096LPE2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SAA2-SAA4A0A096LPE2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SAA2-SAA4A0A096LPE2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAA2-SAA4A0A096LPE2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SAA2-SAA4A0A096LPE2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SAA2-SAA4A0A096LPE2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SAA2-SAA4A0A096LPE2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SAA2-SAA4A0A096LPE2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAA2-SAA4A0A096LPE2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.17■□□□□ 0.5
SAA2-SAA4A0A096LPE2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAA2-SAA4A0A096LPE2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAA2-SAA4A0A096LPE2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SAA2-SAA4A0A096LPE2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAA2-SAA4A0A096LPE2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SAA2-SAA4A0A096LPE2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAA2-SAA4A0A096LPE2 AL117328.2-201ENST00000624617 1940 ntBASIC18.16■□□□□ 0.5
SAA2-SAA4A0A096LPE2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAA2-SAA4A0A096LPE2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SAA2-SAA4A0A096LPE2 LINC01529-204ENST00000636474 1715 ntBASIC18.16■□□□□ 0.5
SAA2-SAA4A0A096LPE2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.16■□□□□ 0.5
SAA2-SAA4A0A096LPE2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SAA2-SAA4A0A096LPE2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.16■□□□□ 0.5
SAA2-SAA4A0A096LPE2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SAA2-SAA4A0A096LPE2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
SAA2-SAA4A0A096LPE2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms