Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHAC2Q9Y5I4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHAC2Q9Y5I4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.96■■□□□ 1.91
PCDHAC2Q9Y5I4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHAC2Q9Y5I4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
PCDHAC2Q9Y5I4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.95■■□□□ 1.91
PCDHAC2Q9Y5I4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PCDHAC2Q9Y5I4 MIR572-201ENST00000384983 95 ntBASIC26.95■■□□□ 1.9
PCDHAC2Q9Y5I4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.95■■□□□ 1.9
PCDHAC2Q9Y5I4 AC027612.3-201ENST00000413684 1047 ntBASIC26.95■■□□□ 1.9
PCDHAC2Q9Y5I4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.95■■□□□ 1.9
PCDHAC2Q9Y5I4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.95■■□□□ 1.9
PCDHAC2Q9Y5I4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.95■■□□□ 1.9
PCDHAC2Q9Y5I4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
PCDHAC2Q9Y5I4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.95■■□□□ 1.9
PCDHAC2Q9Y5I4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.95■■□□□ 1.9
PCDHAC2Q9Y5I4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.94■■□□□ 1.9
PCDHAC2Q9Y5I4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHAC2Q9Y5I4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
PCDHAC2Q9Y5I4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.94■■□□□ 1.9
PCDHAC2Q9Y5I4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHAC2Q9Y5I4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.94■■□□□ 1.9
PCDHAC2Q9Y5I4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHAC2Q9Y5I4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC26.94■■□□□ 1.9
PCDHAC2Q9Y5I4 AC012414.1-201ENST00000556676 535 ntBASIC26.94■■□□□ 1.9
PCDHAC2Q9Y5I4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHAC2Q9Y5I4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHAC2Q9Y5I4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHAC2Q9Y5I4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHAC2Q9Y5I4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHAC2Q9Y5I4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
PCDHAC2Q9Y5I4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
PCDHAC2Q9Y5I4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.93■■□□□ 1.9
PCDHAC2Q9Y5I4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC26.93■■□□□ 1.9
PCDHAC2Q9Y5I4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC26.93■■□□□ 1.9
PCDHAC2Q9Y5I4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.93■■□□□ 1.9
PCDHAC2Q9Y5I4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHAC2Q9Y5I4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
PCDHAC2Q9Y5I4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHAC2Q9Y5I4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHAC2Q9Y5I4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHAC2Q9Y5I4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHAC2Q9Y5I4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHAC2Q9Y5I4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHAC2Q9Y5I4 CCDC92B-201ENST00000575506 885 ntBASIC26.92■■□□□ 1.9
PCDHAC2Q9Y5I4 AL358852.1-201ENST00000623174 1268 ntBASIC26.92■■□□□ 1.9
PCDHAC2Q9Y5I4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHAC2Q9Y5I4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHAC2Q9Y5I4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHAC2Q9Y5I4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHAC2Q9Y5I4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHAC2Q9Y5I4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.91■■□□□ 1.9
PCDHAC2Q9Y5I4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.91■■□□□ 1.9
PCDHAC2Q9Y5I4 AL499627.2-201ENST00000606283 725 ntBASIC26.91■■□□□ 1.9
PCDHAC2Q9Y5I4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.91■■□□□ 1.9
PCDHAC2Q9Y5I4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.91■■□□□ 1.9
PCDHAC2Q9Y5I4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHAC2Q9Y5I4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHAC2Q9Y5I4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.91■■□□□ 1.9
PCDHAC2Q9Y5I4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHAC2Q9Y5I4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHAC2Q9Y5I4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHAC2Q9Y5I4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHAC2Q9Y5I4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHAC2Q9Y5I4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHAC2Q9Y5I4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHAC2Q9Y5I4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHAC2Q9Y5I4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHAC2Q9Y5I4 AC004911.1-201ENST00000416316 871 ntBASIC26.9■■□□□ 1.9
PCDHAC2Q9Y5I4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.9■■□□□ 1.9
PCDHAC2Q9Y5I4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
PCDHAC2Q9Y5I4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHAC2Q9Y5I4 AC138932.3-201ENST00000567634 1902 ntBASIC26.9■■□□□ 1.9
PCDHAC2Q9Y5I4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.9■■□□□ 1.9
PCDHAC2Q9Y5I4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHAC2Q9Y5I4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHAC2Q9Y5I4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
PCDHAC2Q9Y5I4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHAC2Q9Y5I4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHAC2Q9Y5I4 AC123595.1-201ENST00000440769 1046 ntBASIC26.89■■□□□ 1.9
PCDHAC2Q9Y5I4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHAC2Q9Y5I4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PCDHAC2Q9Y5I4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.89■■□□□ 1.89
PCDHAC2Q9Y5I4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
PCDHAC2Q9Y5I4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHAC2Q9Y5I4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
PCDHAC2Q9Y5I4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHAC2Q9Y5I4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.88■■□□□ 1.89
PCDHAC2Q9Y5I4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
PCDHAC2Q9Y5I4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHAC2Q9Y5I4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHAC2Q9Y5I4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.87■■□□□ 1.89
PCDHAC2Q9Y5I4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
PCDHAC2Q9Y5I4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC26.87■■□□□ 1.89
PCDHAC2Q9Y5I4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.87■■□□□ 1.89
PCDHAC2Q9Y5I4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHAC2Q9Y5I4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHAC2Q9Y5I4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.86■■□□□ 1.89
PCDHAC2Q9Y5I4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
PCDHAC2Q9Y5I4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.86■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms