Protein–RNA interactions for Protein: Q9Y5E4

PCDHB5, Protocadherin beta-5, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5Q9Y5E4 AC099791.1-201ENST00000416440 715 ntBASIC23.68■■□□□ 1.38
PCDHB5Q9Y5E4 BX842568.3-201ENST00000418104 571 ntBASIC23.68■■□□□ 1.38
PCDHB5Q9Y5E4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHB5Q9Y5E4 AC233992.3-201ENST00000607491 485 ntBASIC23.68■■□□□ 1.38
PCDHB5Q9Y5E4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB5Q9Y5E4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB5Q9Y5E4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB5Q9Y5E4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB5Q9Y5E4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHB5Q9Y5E4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB5Q9Y5E4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB5Q9Y5E4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB5Q9Y5E4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
PCDHB5Q9Y5E4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB5Q9Y5E4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB5Q9Y5E4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHB5Q9Y5E4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB5Q9Y5E4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHB5Q9Y5E4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHB5Q9Y5E4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.67■■□□□ 1.38
PCDHB5Q9Y5E4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB5Q9Y5E4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB5Q9Y5E4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHB5Q9Y5E4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
PCDHB5Q9Y5E4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB5Q9Y5E4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB5Q9Y5E4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
PCDHB5Q9Y5E4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB5Q9Y5E4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB5Q9Y5E4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB5Q9Y5E4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHB5Q9Y5E4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.66■■□□□ 1.38
PCDHB5Q9Y5E4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB5Q9Y5E4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHB5Q9Y5E4 AL499627.2-201ENST00000606283 725 ntBASIC23.66■■□□□ 1.38
PCDHB5Q9Y5E4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB5Q9Y5E4 LINC01529-204ENST00000636474 1715 ntBASIC23.66■■□□□ 1.38
PCDHB5Q9Y5E4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDHB5Q9Y5E4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB5Q9Y5E4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHB5Q9Y5E4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHB5Q9Y5E4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHB5Q9Y5E4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHB5Q9Y5E4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHB5Q9Y5E4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.65■■□□□ 1.38
PCDHB5Q9Y5E4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHB5Q9Y5E4 AC133637.1-201ENST00000624115 1537 ntBASIC23.64■■□□□ 1.38
PCDHB5Q9Y5E4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHB5Q9Y5E4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.64■■□□□ 1.38
PCDHB5Q9Y5E4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHB5Q9Y5E4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHB5Q9Y5E4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.64■■□□□ 1.37
PCDHB5Q9Y5E4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHB5Q9Y5E4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHB5Q9Y5E4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.64■■□□□ 1.37
PCDHB5Q9Y5E4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.64■■□□□ 1.37
PCDHB5Q9Y5E4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
PCDHB5Q9Y5E4 ABCB10P4-201ENST00000566803 2184 ntBASIC23.64■■□□□ 1.37
PCDHB5Q9Y5E4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB5Q9Y5E4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB5Q9Y5E4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHB5Q9Y5E4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHB5Q9Y5E4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
PCDHB5Q9Y5E4 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHB5Q9Y5E4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB5Q9Y5E4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB5Q9Y5E4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB5Q9Y5E4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB5Q9Y5E4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.62■■□□□ 1.37
PCDHB5Q9Y5E4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB5Q9Y5E4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHB5Q9Y5E4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB5Q9Y5E4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHB5Q9Y5E4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB5Q9Y5E4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHB5Q9Y5E4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB5Q9Y5E4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB5Q9Y5E4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHB5Q9Y5E4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB5Q9Y5E4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDHB5Q9Y5E4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHB5Q9Y5E4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDHB5Q9Y5E4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.6■■□□□ 1.37
PCDHB5Q9Y5E4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHB5Q9Y5E4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHB5Q9Y5E4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
PCDHB5Q9Y5E4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
PCDHB5Q9Y5E4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHB5Q9Y5E4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB5Q9Y5E4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHB5Q9Y5E4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHB5Q9Y5E4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB5Q9Y5E4 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.59■■□□□ 1.37
PCDHB5Q9Y5E4 SLC47A1P1-202ENST00000449666 945 ntBASIC23.59■■□□□ 1.37
PCDHB5Q9Y5E4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB5Q9Y5E4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB5Q9Y5E4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHB5Q9Y5E4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDHB5Q9Y5E4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDHB5Q9Y5E4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms