Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRIT1Q9P2V4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LRIT1Q9P2V4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRIT1Q9P2V4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LRIT1Q9P2V4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.72■■□□□ 1.07
LRIT1Q9P2V4 AC133637.1-201ENST00000624115 1537 ntBASIC21.72■■□□□ 1.07
LRIT1Q9P2V4 SLC47A1P1-202ENST00000449666 945 ntBASIC21.72■■□□□ 1.07
LRIT1Q9P2V4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.72■■□□□ 1.07
LRIT1Q9P2V4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRIT1Q9P2V4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRIT1Q9P2V4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.72■■□□□ 1.07
LRIT1Q9P2V4 FP325331.1-202ENST00000623531 1380 ntBASIC21.72■■□□□ 1.07
LRIT1Q9P2V4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.72■■□□□ 1.07
LRIT1Q9P2V4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRIT1Q9P2V4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRIT1Q9P2V4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRIT1Q9P2V4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LRIT1Q9P2V4 AC104564.3-201ENST00000582367 638 ntBASIC21.71■■□□□ 1.07
LRIT1Q9P2V4 AC087623.3-201ENST00000607047 1098 ntBASIC21.71■■□□□ 1.07
LRIT1Q9P2V4 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.71■■□□□ 1.07
LRIT1Q9P2V4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRIT1Q9P2V4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.71■■□□□ 1.07
LRIT1Q9P2V4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRIT1Q9P2V4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.71■■□□□ 1.07
LRIT1Q9P2V4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LRIT1Q9P2V4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
LRIT1Q9P2V4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRIT1Q9P2V4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRIT1Q9P2V4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
LRIT1Q9P2V4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.7■■□□□ 1.06
LRIT1Q9P2V4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.7■■□□□ 1.06
LRIT1Q9P2V4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.7■■□□□ 1.06
LRIT1Q9P2V4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
LRIT1Q9P2V4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRIT1Q9P2V4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
LRIT1Q9P2V4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRIT1Q9P2V4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRIT1Q9P2V4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRIT1Q9P2V4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.69■■□□□ 1.06
LRIT1Q9P2V4 AL499627.2-201ENST00000606283 725 ntBASIC21.69■■□□□ 1.06
LRIT1Q9P2V4 TSPY26P-201ENST00000476365 1326 ntBASIC21.69■■□□□ 1.06
LRIT1Q9P2V4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRIT1Q9P2V4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRIT1Q9P2V4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
LRIT1Q9P2V4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRIT1Q9P2V4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
LRIT1Q9P2V4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRIT1Q9P2V4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRIT1Q9P2V4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRIT1Q9P2V4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.68■■□□□ 1.06
LRIT1Q9P2V4 DUX4L4-201ENST00000566884 1269 ntBASIC21.68■■□□□ 1.06
LRIT1Q9P2V4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
LRIT1Q9P2V4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRIT1Q9P2V4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.68■■□□□ 1.06
LRIT1Q9P2V4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRIT1Q9P2V4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRIT1Q9P2V4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
LRIT1Q9P2V4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRIT1Q9P2V4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
LRIT1Q9P2V4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LRIT1Q9P2V4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
LRIT1Q9P2V4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
LRIT1Q9P2V4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRIT1Q9P2V4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.67■■□□□ 1.06
LRIT1Q9P2V4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.67■■□□□ 1.06
LRIT1Q9P2V4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.67■■□□□ 1.06
LRIT1Q9P2V4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRIT1Q9P2V4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.66■■□□□ 1.06
LRIT1Q9P2V4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
LRIT1Q9P2V4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRIT1Q9P2V4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
LRIT1Q9P2V4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRIT1Q9P2V4 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.66■■□□□ 1.06
LRIT1Q9P2V4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.66■■□□□ 1.06
LRIT1Q9P2V4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRIT1Q9P2V4 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.66■■□□□ 1.06
LRIT1Q9P2V4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRIT1Q9P2V4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
LRIT1Q9P2V4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRIT1Q9P2V4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRIT1Q9P2V4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.66■■□□□ 1.06
LRIT1Q9P2V4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRIT1Q9P2V4 AC144652.1-201ENST00000609974 1624 ntBASIC21.66■■□□□ 1.06
LRIT1Q9P2V4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
LRIT1Q9P2V4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRIT1Q9P2V4 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
LRIT1Q9P2V4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LRIT1Q9P2V4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRIT1Q9P2V4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRIT1Q9P2V4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRIT1Q9P2V4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRIT1Q9P2V4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.65■■□□□ 1.06
LRIT1Q9P2V4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.65■■□□□ 1.06
LRIT1Q9P2V4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.65■■□□□ 1.06
LRIT1Q9P2V4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.65■■□□□ 1.06
LRIT1Q9P2V4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LRIT1Q9P2V4 LINC01529-204ENST00000636474 1715 ntBASIC21.65■■□□□ 1.06
LRIT1Q9P2V4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LRIT1Q9P2V4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRIT1Q9P2V4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms