Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC31.97■■■□□ 2.71
LTBP4Q8N2S1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC31.96■■■□□ 2.71
LTBP4Q8N2S1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
LTBP4Q8N2S1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
LTBP4Q8N2S1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
LTBP4Q8N2S1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
LTBP4Q8N2S1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
LTBP4Q8N2S1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC31.96■■■□□ 2.71
LTBP4Q8N2S1 SLC29A4P1-201ENST00000398760 971 ntBASIC31.95■■■□□ 2.71
LTBP4Q8N2S1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC31.94■■■□□ 2.7
LTBP4Q8N2S1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
LTBP4Q8N2S1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
LTBP4Q8N2S1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
LTBP4Q8N2S1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC31.94■■■□□ 2.7
LTBP4Q8N2S1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
LTBP4Q8N2S1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC31.94■■■□□ 2.7
LTBP4Q8N2S1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC31.94■■■□□ 2.7
LTBP4Q8N2S1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC31.94■■■□□ 2.7
LTBP4Q8N2S1 GCSHP5-201ENST00000443090 522 ntBASIC31.93■■■□□ 2.7
LTBP4Q8N2S1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC31.93■■■□□ 2.7
LTBP4Q8N2S1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC31.93■■■□□ 2.7
LTBP4Q8N2S1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC31.93■■■□□ 2.7
LTBP4Q8N2S1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
LTBP4Q8N2S1 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
LTBP4Q8N2S1 AC133041.1-202ENST00000642053 222 ntBASIC31.93■■■□□ 2.7
LTBP4Q8N2S1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
LTBP4Q8N2S1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
LTBP4Q8N2S1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
LTBP4Q8N2S1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
LTBP4Q8N2S1 AC133637.1-201ENST00000624115 1537 ntBASIC31.92■■■□□ 2.7
LTBP4Q8N2S1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
LTBP4Q8N2S1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
LTBP4Q8N2S1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
LTBP4Q8N2S1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
LTBP4Q8N2S1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC31.91■■■□□ 2.7
LTBP4Q8N2S1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC31.91■■■□□ 2.7
LTBP4Q8N2S1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
LTBP4Q8N2S1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
LTBP4Q8N2S1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
LTBP4Q8N2S1 AC141586.4-201ENST00000624558 1573 ntBASIC31.9■■■□□ 2.7
LTBP4Q8N2S1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
LTBP4Q8N2S1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
LTBP4Q8N2S1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
LTBP4Q8N2S1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC31.9■■■□□ 2.7
LTBP4Q8N2S1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC31.9■■■□□ 2.7
LTBP4Q8N2S1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC31.9■■■□□ 2.7
LTBP4Q8N2S1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
LTBP4Q8N2S1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
LTBP4Q8N2S1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
LTBP4Q8N2S1 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC31.89■■■□□ 2.7
LTBP4Q8N2S1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
LTBP4Q8N2S1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
LTBP4Q8N2S1 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
LTBP4Q8N2S1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
LTBP4Q8N2S1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
LTBP4Q8N2S1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
LTBP4Q8N2S1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC31.88■■■□□ 2.69
LTBP4Q8N2S1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
LTBP4Q8N2S1 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
LTBP4Q8N2S1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC31.87■■■□□ 2.69
LTBP4Q8N2S1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
LTBP4Q8N2S1 AC005181.1-201ENST00000604782 1256 ntBASIC31.87■■■□□ 2.69
LTBP4Q8N2S1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
LTBP4Q8N2S1 DUSP5P2-201ENST00000426873 1033 ntBASIC31.86■■■□□ 2.69
LTBP4Q8N2S1 AC231657.2-201ENST00000624556 255 ntBASIC31.86■■■□□ 2.69
LTBP4Q8N2S1 AP006294.2-201ENST00000641667 209 ntBASIC31.86■■■□□ 2.69
LTBP4Q8N2S1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
LTBP4Q8N2S1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC31.86■■■□□ 2.69
LTBP4Q8N2S1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC31.86■■■□□ 2.69
LTBP4Q8N2S1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC31.86■■■□□ 2.69
LTBP4Q8N2S1 SLC7A5P1-201ENST00000568957 537 ntBASIC31.86■■■□□ 2.69
LTBP4Q8N2S1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.85■■■□□ 2.69
LTBP4Q8N2S1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
LTBP4Q8N2S1 DUX4L16-201ENST00000555130 1264 ntBASIC31.85■■■□□ 2.69
LTBP4Q8N2S1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC31.85■■■□□ 2.69
LTBP4Q8N2S1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC31.84■■■□□ 2.69
LTBP4Q8N2S1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC31.84■■■□□ 2.69
LTBP4Q8N2S1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
LTBP4Q8N2S1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
LTBP4Q8N2S1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
LTBP4Q8N2S1 MIR1224-201ENST00000408193 85 ntBASIC31.83■■■□□ 2.69
LTBP4Q8N2S1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC31.83■■■□□ 2.69
LTBP4Q8N2S1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
LTBP4Q8N2S1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC31.83■■■□□ 2.69
LTBP4Q8N2S1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
LTBP4Q8N2S1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
LTBP4Q8N2S1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC31.82■■■□□ 2.69
LTBP4Q8N2S1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC31.82■■■□□ 2.69
LTBP4Q8N2S1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC31.82■■■□□ 2.69
LTBP4Q8N2S1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC31.82■■■□□ 2.69
LTBP4Q8N2S1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
LTBP4Q8N2S1 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
LTBP4Q8N2S1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
LTBP4Q8N2S1 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
LTBP4Q8N2S1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
LTBP4Q8N2S1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC31.81■■■□□ 2.68
LTBP4Q8N2S1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.8■■■□□ 2.68
LTBP4Q8N2S1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
LTBP4Q8N2S1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC31.8■■■□□ 2.68
LTBP4Q8N2S1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC31.8■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 242 ms