Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
XRN1Q8IZH2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC31.7■■■□□ 2.66
XRN1Q8IZH2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
XRN1Q8IZH2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
XRN1Q8IZH2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC31.69■■■□□ 2.66
XRN1Q8IZH2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC31.69■■■□□ 2.66
XRN1Q8IZH2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC31.69■■■□□ 2.66
XRN1Q8IZH2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
XRN1Q8IZH2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
XRN1Q8IZH2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC31.68■■■□□ 2.66
XRN1Q8IZH2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC31.68■■■□□ 2.66
XRN1Q8IZH2 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
XRN1Q8IZH2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
XRN1Q8IZH2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
XRN1Q8IZH2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
XRN1Q8IZH2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
XRN1Q8IZH2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
XRN1Q8IZH2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
XRN1Q8IZH2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
XRN1Q8IZH2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
XRN1Q8IZH2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
XRN1Q8IZH2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
XRN1Q8IZH2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC31.66■■■□□ 2.66
XRN1Q8IZH2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC31.65■■■□□ 2.66
XRN1Q8IZH2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC31.65■■■□□ 2.66
XRN1Q8IZH2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC31.65■■■□□ 2.66
XRN1Q8IZH2 ABHD17AP1-201ENST00000358206 933 ntBASIC31.65■■■□□ 2.66
XRN1Q8IZH2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC31.65■■■□□ 2.66
XRN1Q8IZH2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC31.65■■■□□ 2.66
XRN1Q8IZH2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC31.65■■■□□ 2.66
XRN1Q8IZH2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
XRN1Q8IZH2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
XRN1Q8IZH2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC31.64■■■□□ 2.66
XRN1Q8IZH2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
XRN1Q8IZH2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC31.64■■■□□ 2.66
XRN1Q8IZH2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC31.64■■■□□ 2.66
XRN1Q8IZH2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
XRN1Q8IZH2 HLA-L-211ENST00000482052 1765 ntBASIC31.64■■■□□ 2.66
XRN1Q8IZH2 AC091060.1-201ENST00000623524 1766 ntBASIC31.64■■■□□ 2.66
XRN1Q8IZH2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
XRN1Q8IZH2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
XRN1Q8IZH2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.65
XRN1Q8IZH2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
XRN1Q8IZH2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
XRN1Q8IZH2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
XRN1Q8IZH2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC31.63■■■□□ 2.65
XRN1Q8IZH2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC31.63■■■□□ 2.65
XRN1Q8IZH2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC31.63■■■□□ 2.65
XRN1Q8IZH2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
XRN1Q8IZH2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
XRN1Q8IZH2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC31.63■■■□□ 2.65
XRN1Q8IZH2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
XRN1Q8IZH2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
XRN1Q8IZH2 CDCA4P2-201ENST00000441182 718 ntBASIC31.63■■■□□ 2.65
XRN1Q8IZH2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
XRN1Q8IZH2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC31.63■■■□□ 2.65
XRN1Q8IZH2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
XRN1Q8IZH2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
XRN1Q8IZH2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
XRN1Q8IZH2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
XRN1Q8IZH2 AP005435.1-201ENST00000529293 1178 ntBASIC31.62■■■□□ 2.65
XRN1Q8IZH2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC31.62■■■□□ 2.65
XRN1Q8IZH2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC31.62■■■□□ 2.65
XRN1Q8IZH2 AC104771.1-201ENST00000603335 964 ntBASIC31.62■■■□□ 2.65
XRN1Q8IZH2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
XRN1Q8IZH2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
XRN1Q8IZH2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
XRN1Q8IZH2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
XRN1Q8IZH2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC31.61■■■□□ 2.65
XRN1Q8IZH2 AC080038.1-201ENST00000611274 1154 ntBASIC31.61■■■□□ 2.65
XRN1Q8IZH2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC31.61■■■□□ 2.65
XRN1Q8IZH2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
XRN1Q8IZH2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
XRN1Q8IZH2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC31.61■■■□□ 2.65
XRN1Q8IZH2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC31.61■■■□□ 2.65
XRN1Q8IZH2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC31.61■■■□□ 2.65
XRN1Q8IZH2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
XRN1Q8IZH2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
XRN1Q8IZH2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
XRN1Q8IZH2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
XRN1Q8IZH2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
XRN1Q8IZH2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
XRN1Q8IZH2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC31.6■■■□□ 2.65
XRN1Q8IZH2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
XRN1Q8IZH2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
XRN1Q8IZH2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC31.59■■■□□ 2.65
XRN1Q8IZH2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
XRN1Q8IZH2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC31.59■■■□□ 2.65
XRN1Q8IZH2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC31.59■■■□□ 2.65
XRN1Q8IZH2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
XRN1Q8IZH2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC31.59■■■□□ 2.65
XRN1Q8IZH2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC31.59■■■□□ 2.65
XRN1Q8IZH2 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
XRN1Q8IZH2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC31.58■■■□□ 2.65
XRN1Q8IZH2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
XRN1Q8IZH2 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC31.58■■■□□ 2.65
XRN1Q8IZH2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC31.58■■■□□ 2.65
XRN1Q8IZH2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC31.57■■■□□ 2.64
XRN1Q8IZH2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
XRN1Q8IZH2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms