Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-5A0A0J9YX44 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV5-5A0A0J9YX44 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-5A0A0J9YX44 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-5A0A0J9YX44 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-5A0A0J9YX44 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-5A0A0J9YX44 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-5A0A0J9YX44 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRBV5-5A0A0J9YX44 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.5■□□□□ 0.71
TRBV5-5A0A0J9YX44 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV5-5A0A0J9YX44 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-5A0A0J9YX44 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV5-5A0A0J9YX44 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-5A0A0J9YX44 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-5A0A0J9YX44 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
TRBV5-5A0A0J9YX44 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-5A0A0J9YX44 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRBV5-5A0A0J9YX44 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRBV5-5A0A0J9YX44 AL353803.4-201ENST00000565882 1934 ntBASIC19.49■□□□□ 0.71
TRBV5-5A0A0J9YX44 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.49■□□□□ 0.71
TRBV5-5A0A0J9YX44 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.49■□□□□ 0.71
TRBV5-5A0A0J9YX44 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.49■□□□□ 0.71
TRBV5-5A0A0J9YX44 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-5A0A0J9YX44 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-5A0A0J9YX44 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.49■□□□□ 0.71
TRBV5-5A0A0J9YX44 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-5A0A0J9YX44 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.49■□□□□ 0.71
TRBV5-5A0A0J9YX44 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.49■□□□□ 0.71
TRBV5-5A0A0J9YX44 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-5A0A0J9YX44 AF131216.4-201ENST00000638924 1588 ntBASIC19.49■□□□□ 0.71
TRBV5-5A0A0J9YX44 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.48■□□□□ 0.71
TRBV5-5A0A0J9YX44 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRBV5-5A0A0J9YX44 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-5A0A0J9YX44 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-5A0A0J9YX44 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.48■□□□□ 0.71
TRBV5-5A0A0J9YX44 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-5A0A0J9YX44 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TRBV5-5A0A0J9YX44 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-5A0A0J9YX44 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-5A0A0J9YX44 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-5A0A0J9YX44 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-5A0A0J9YX44 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-5A0A0J9YX44 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-5A0A0J9YX44 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-5A0A0J9YX44 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.47■□□□□ 0.71
TRBV5-5A0A0J9YX44 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRBV5-5A0A0J9YX44 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRBV5-5A0A0J9YX44 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-5A0A0J9YX44 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRBV5-5A0A0J9YX44 AC092053.2-201ENST00000640557 1818 ntBASIC19.47■□□□□ 0.71
TRBV5-5A0A0J9YX44 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.47■□□□□ 0.71
TRBV5-5A0A0J9YX44 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.47■□□□□ 0.71
TRBV5-5A0A0J9YX44 RARRES2P2-201ENST00000394842 485 ntBASIC19.47■□□□□ 0.71
TRBV5-5A0A0J9YX44 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRBV5-5A0A0J9YX44 AC007375.3-201ENST00000600936 2314 ntBASIC19.47■□□□□ 0.71
TRBV5-5A0A0J9YX44 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-5A0A0J9YX44 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV5-5A0A0J9YX44 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV5-5A0A0J9YX44 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TRBV5-5A0A0J9YX44 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV5-5A0A0J9YX44 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
TRBV5-5A0A0J9YX44 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRBV5-5A0A0J9YX44 KRT18P60-201ENST00000312876 1297 ntBASIC19.46■□□□□ 0.71
TRBV5-5A0A0J9YX44 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV5-5A0A0J9YX44 AC004448.1-201ENST00000458332 883 ntBASIC19.46■□□□□ 0.71
TRBV5-5A0A0J9YX44 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.46■□□□□ 0.71
TRBV5-5A0A0J9YX44 AC120024.1-201ENST00000562672 995 ntBASIC19.46■□□□□ 0.71
TRBV5-5A0A0J9YX44 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.46■□□□□ 0.71
TRBV5-5A0A0J9YX44 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV5-5A0A0J9YX44 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.46■□□□□ 0.71
TRBV5-5A0A0J9YX44 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.46■□□□□ 0.71
TRBV5-5A0A0J9YX44 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
TRBV5-5A0A0J9YX44 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV5-5A0A0J9YX44 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV5-5A0A0J9YX44 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.45■□□□□ 0.7
TRBV5-5A0A0J9YX44 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV5-5A0A0J9YX44 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV5-5A0A0J9YX44 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
TRBV5-5A0A0J9YX44 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRBV5-5A0A0J9YX44 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV5-5A0A0J9YX44 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
TRBV5-5A0A0J9YX44 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRBV5-5A0A0J9YX44 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV5-5A0A0J9YX44 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.45■□□□□ 0.7
TRBV5-5A0A0J9YX44 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV5-5A0A0J9YX44 C11orf96-202ENST00000528572 1834 ntBASIC19.44■□□□□ 0.7
TRBV5-5A0A0J9YX44 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV5-5A0A0J9YX44 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRBV5-5A0A0J9YX44 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV5-5A0A0J9YX44 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.44■□□□□ 0.7
TRBV5-5A0A0J9YX44 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV5-5A0A0J9YX44 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRBV5-5A0A0J9YX44 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV5-5A0A0J9YX44 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.44■□□□□ 0.7
TRBV5-5A0A0J9YX44 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV5-5A0A0J9YX44 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRBV5-5A0A0J9YX44 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRBV5-5A0A0J9YX44 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRBV5-5A0A0J9YX44 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV5-5A0A0J9YX44 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms