Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
SYNE2Q8WXH0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC12.17□□□□□ -0.46
SYNE2Q8WXH0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC12.17□□□□□ -0.46
SYNE2Q8WXH0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SYNE2Q8WXH0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC12.16□□□□□ -0.46
SYNE2Q8WXH0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SYNE2Q8WXH0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SYNE2Q8WXH0 ABHD17AP3-201ENST00000503096 1137 ntBASIC12.15□□□□□ -0.46
SYNE2Q8WXH0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
SYNE2Q8WXH0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SYNE2Q8WXH0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC12.14□□□□□ -0.47
SYNE2Q8WXH0 AL592295.1-201ENST00000400984 884 ntBASIC12.14□□□□□ -0.47
SYNE2Q8WXH0 ZNRF2P2-203ENST00000454624 420 ntBASIC12.14□□□□□ -0.47
SYNE2Q8WXH0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC12.14□□□□□ -0.47
SYNE2Q8WXH0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SYNE2Q8WXH0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
SYNE2Q8WXH0 AC019069.1-201ENST00000610008 1333 ntBASIC12.13□□□□□ -0.47
SYNE2Q8WXH0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SYNE2Q8WXH0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC12.13□□□□□ -0.47
SYNE2Q8WXH0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SYNE2Q8WXH0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SYNE2Q8WXH0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SYNE2Q8WXH0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SYNE2Q8WXH0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC12.12□□□□□ -0.47
SYNE2Q8WXH0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC12.11□□□□□ -0.47
SYNE2Q8WXH0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYNE2Q8WXH0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC12.11□□□□□ -0.47
SYNE2Q8WXH0 AL391121.1-201ENST00000607967 1349 ntBASIC12.11□□□□□ -0.47
SYNE2Q8WXH0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SYNE2Q8WXH0 MIR935-201ENST00000401179 91 ntBASIC12.11□□□□□ -0.47
SYNE2Q8WXH0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
SYNE2Q8WXH0 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SYNE2Q8WXH0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SYNE2Q8WXH0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
SYNE2Q8WXH0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC12.08□□□□□ -0.48
SYNE2Q8WXH0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC12.08□□□□□ -0.48
SYNE2Q8WXH0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYNE2Q8WXH0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SYNE2Q8WXH0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SYNE2Q8WXH0 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYNE2Q8WXH0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SYNE2Q8WXH0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC12.05□□□□□ -0.48
SYNE2Q8WXH0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SYNE2Q8WXH0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SYNE2Q8WXH0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC12.02□□□□□ -0.48
SYNE2Q8WXH0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC12.02□□□□□ -0.49
SYNE2Q8WXH0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SYNE2Q8WXH0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC12.01□□□□□ -0.49
SYNE2Q8WXH0 DUX4L28-201ENST00000623687 678 ntBASIC12.01□□□□□ -0.49
SYNE2Q8WXH0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SYNE2Q8WXH0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC12□□□□□ -0.49
SYNE2Q8WXH0 ABHD17AP5-201ENST00000580133 923 ntBASIC12□□□□□ -0.49
SYNE2Q8WXH0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SYNE2Q8WXH0 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SYNE2Q8WXH0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SYNE2Q8WXH0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC11.99□□□□□ -0.49
SYNE2Q8WXH0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SYNE2Q8WXH0 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SYNE2Q8WXH0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SYNE2Q8WXH0 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC11.97□□□□□ -0.49
SYNE2Q8WXH0 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC11.96□□□□□ -0.5
SYNE2Q8WXH0 AC018358.1-201ENST00000631079 1402 ntBASIC11.95□□□□□ -0.5
SYNE2Q8WXH0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC11.95□□□□□ -0.5
SYNE2Q8WXH0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SYNE2Q8WXH0 CR559946.2-201ENST00000623684 991 ntBASIC11.95□□□□□ -0.5
SYNE2Q8WXH0 AC044849.2-201ENST00000606596 710 ntBASIC11.95□□□□□ -0.5
SYNE2Q8WXH0 AC016575.1-201ENST00000607026 382 ntBASIC11.94□□□□□ -0.5
SYNE2Q8WXH0 RARRES2P2-201ENST00000394842 485 ntBASIC11.94□□□□□ -0.5
SYNE2Q8WXH0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SYNE2Q8WXH0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC11.93□□□□□ -0.5
SYNE2Q8WXH0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC11.93□□□□□ -0.5
SYNE2Q8WXH0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SYNE2Q8WXH0 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SYNE2Q8WXH0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SYNE2Q8WXH0 MIR762-201ENST00000390236 83 ntBASIC11.92□□□□□ -0.5
SYNE2Q8WXH0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC11.91□□□□□ -0.5
SYNE2Q8WXH0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC11.91□□□□□ -0.5
SYNE2Q8WXH0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SYNE2Q8WXH0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SYNE2Q8WXH0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC11.9□□□□□ -0.5
SYNE2Q8WXH0 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SYNE2Q8WXH0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC11.89□□□□□ -0.51
SYNE2Q8WXH0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SYNE2Q8WXH0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SYNE2Q8WXH0 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC11.88□□□□□ -0.51
SYNE2Q8WXH0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SYNE2Q8WXH0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SYNE2Q8WXH0 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SYNE2Q8WXH0 MIR3648-2-201ENST00000581792 180 ntBASIC11.87□□□□□ -0.51
SYNE2Q8WXH0 MIR3648-1-201ENST00000615959 180 ntBASIC11.87□□□□□ -0.51
SYNE2Q8WXH0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
SYNE2Q8WXH0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SYNE2Q8WXH0 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
SYNE2Q8WXH0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC11.85□□□□□ -0.51
SYNE2Q8WXH0 AC005559.1-201ENST00000589661 871 ntBASIC11.84□□□□□ -0.51
SYNE2Q8WXH0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SYNE2Q8WXH0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SYNE2Q8WXH0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SYNE2Q8WXH0 CHML-205ENST00000638160 705 ntTSL 3 BASIC11.83□□□□□ -0.52
SYNE2Q8WXH0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms