Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
LTBP4Q8N2S1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
LTBP4Q8N2S1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC32.11■■■□□ 2.73
LTBP4Q8N2S1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
LTBP4Q8N2S1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
LTBP4Q8N2S1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC32.11■■■□□ 2.73
LTBP4Q8N2S1 MDK-213ENST00000617138 635 ntTSL 2 BASIC32.11■■■□□ 2.73
LTBP4Q8N2S1 LINC01003-201ENST00000564834 1764 ntBASIC32.1■■■□□ 2.73
LTBP4Q8N2S1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
LTBP4Q8N2S1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
LTBP4Q8N2S1 AC010525.1-201ENST00000585559 441 ntBASIC32.1■■■□□ 2.73
LTBP4Q8N2S1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
LTBP4Q8N2S1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
LTBP4Q8N2S1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
LTBP4Q8N2S1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
LTBP4Q8N2S1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC32.09■■■□□ 2.73
LTBP4Q8N2S1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC32.09■■■□□ 2.73
LTBP4Q8N2S1 MFSD11-216ENST00000590393 1141 ntBASIC32.09■■■□□ 2.73
LTBP4Q8N2S1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
LTBP4Q8N2S1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
LTBP4Q8N2S1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC32.08■■■□□ 2.73
LTBP4Q8N2S1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC32.08■■■□□ 2.73
LTBP4Q8N2S1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
LTBP4Q8N2S1 KRT18P11-201ENST00000435214 1283 ntBASIC32.08■■■□□ 2.73
LTBP4Q8N2S1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC32.08■■■□□ 2.73
LTBP4Q8N2S1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC32.08■■■□□ 2.73
LTBP4Q8N2S1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC32.08■■■□□ 2.73
LTBP4Q8N2S1 SMUG1P1-201ENST00000590640 811 ntBASIC32.08■■■□□ 2.73
LTBP4Q8N2S1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC32.08■■■□□ 2.73
LTBP4Q8N2S1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
LTBP4Q8N2S1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
LTBP4Q8N2S1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
LTBP4Q8N2S1 AL596275.1-201ENST00000423464 877 ntBASIC32.07■■■□□ 2.72
LTBP4Q8N2S1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
LTBP4Q8N2S1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
LTBP4Q8N2S1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC32.06■■■□□ 2.72
LTBP4Q8N2S1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC32.06■■■□□ 2.72
LTBP4Q8N2S1 DUX4L4-201ENST00000566884 1269 ntBASIC32.06■■■□□ 2.72
LTBP4Q8N2S1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
LTBP4Q8N2S1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC32.05■■■□□ 2.72
LTBP4Q8N2S1 KRT19P1-201ENST00000405746 1186 ntBASIC32.05■■■□□ 2.72
LTBP4Q8N2S1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC32.05■■■□□ 2.72
LTBP4Q8N2S1 AC105233.4-201ENST00000642045 216 ntBASIC32.05■■■□□ 2.72
LTBP4Q8N2S1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
LTBP4Q8N2S1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
LTBP4Q8N2S1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
LTBP4Q8N2S1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC32.04■■■□□ 2.72
LTBP4Q8N2S1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC32.04■■■□□ 2.72
LTBP4Q8N2S1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
LTBP4Q8N2S1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
LTBP4Q8N2S1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC32.04■■■□□ 2.72
LTBP4Q8N2S1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC32.04■■■□□ 2.72
LTBP4Q8N2S1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC32.04■■■□□ 2.72
LTBP4Q8N2S1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC32.04■■■□□ 2.72
LTBP4Q8N2S1 KRT18P29-201ENST00000397031 1267 ntBASIC32.03■■■□□ 2.72
LTBP4Q8N2S1 AC073210.2-201ENST00000430369 194 ntBASIC32.03■■■□□ 2.72
LTBP4Q8N2S1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
LTBP4Q8N2S1 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
LTBP4Q8N2S1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
LTBP4Q8N2S1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
LTBP4Q8N2S1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
LTBP4Q8N2S1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC32.02■■■□□ 2.72
LTBP4Q8N2S1 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
LTBP4Q8N2S1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC32.02■■■□□ 2.72
LTBP4Q8N2S1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC32.01■■■□□ 2.72
LTBP4Q8N2S1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC32.01■■■□□ 2.72
LTBP4Q8N2S1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC32.01■■■□□ 2.71
LTBP4Q8N2S1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
LTBP4Q8N2S1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC32■■■□□ 2.71
LTBP4Q8N2S1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC32■■■□□ 2.71
LTBP4Q8N2S1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
LTBP4Q8N2S1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC32■■■□□ 2.71
LTBP4Q8N2S1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.99■■■□□ 2.71
LTBP4Q8N2S1 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC31.99■■■□□ 2.71
LTBP4Q8N2S1 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
LTBP4Q8N2S1 OR2I1P-207ENST00000453522 948 ntBASIC31.99■■■□□ 2.71
LTBP4Q8N2S1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
LTBP4Q8N2S1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.99■■■□□ 2.71
LTBP4Q8N2S1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC31.99■■■□□ 2.71
LTBP4Q8N2S1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
LTBP4Q8N2S1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
LTBP4Q8N2S1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
LTBP4Q8N2S1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC31.98■■■□□ 2.71
LTBP4Q8N2S1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
LTBP4Q8N2S1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.98■■■□□ 2.71
LTBP4Q8N2S1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
LTBP4Q8N2S1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
LTBP4Q8N2S1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
LTBP4Q8N2S1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC31.97■■■□□ 2.71
LTBP4Q8N2S1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
LTBP4Q8N2S1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
LTBP4Q8N2S1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
LTBP4Q8N2S1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
LTBP4Q8N2S1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC31.97■■■□□ 2.71
LTBP4Q8N2S1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
LTBP4Q8N2S1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC31.97■■■□□ 2.71
LTBP4Q8N2S1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC31.97■■■□□ 2.71
LTBP4Q8N2S1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC31.97■■■□□ 2.71
LTBP4Q8N2S1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
LTBP4Q8N2S1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC31.97■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms