Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.66■■□□□ 1.06
KRT78Q8N1N4 MIR6724-1-201ENST00000616420 92 ntBASIC21.66■■□□□ 1.06
KRT78Q8N1N4 MIR6724-2-201ENST00000616483 92 ntBASIC21.66■■□□□ 1.06
KRT78Q8N1N4 MIR6724-4-201ENST00000617390 92 ntBASIC21.66■■□□□ 1.06
KRT78Q8N1N4 MIR6724-3-201ENST00000622482 92 ntBASIC21.66■■□□□ 1.06
KRT78Q8N1N4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KRT78Q8N1N4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT78Q8N1N4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT78Q8N1N4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
KRT78Q8N1N4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
KRT78Q8N1N4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.65■■□□□ 1.06
KRT78Q8N1N4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.65■■□□□ 1.06
KRT78Q8N1N4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
KRT78Q8N1N4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT78Q8N1N4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT78Q8N1N4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT78Q8N1N4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
KRT78Q8N1N4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
KRT78Q8N1N4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KRT78Q8N1N4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
KRT78Q8N1N4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KRT78Q8N1N4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
KRT78Q8N1N4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
KRT78Q8N1N4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.64■■□□□ 1.05
KRT78Q8N1N4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
KRT78Q8N1N4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
KRT78Q8N1N4 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.64■■□□□ 1.05
KRT78Q8N1N4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
KRT78Q8N1N4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
KRT78Q8N1N4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
KRT78Q8N1N4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KRT78Q8N1N4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KRT78Q8N1N4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
KRT78Q8N1N4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
KRT78Q8N1N4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.63■■□□□ 1.05
KRT78Q8N1N4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
KRT78Q8N1N4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
KRT78Q8N1N4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
KRT78Q8N1N4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
KRT78Q8N1N4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
KRT78Q8N1N4 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.63■■□□□ 1.05
KRT78Q8N1N4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.63■■□□□ 1.05
KRT78Q8N1N4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRT78Q8N1N4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRT78Q8N1N4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRT78Q8N1N4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.62■■□□□ 1.05
KRT78Q8N1N4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRT78Q8N1N4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
KRT78Q8N1N4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
KRT78Q8N1N4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.62■■□□□ 1.05
KRT78Q8N1N4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.62■■□□□ 1.05
KRT78Q8N1N4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.62■■□□□ 1.05
KRT78Q8N1N4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.62■■□□□ 1.05
KRT78Q8N1N4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.61■■□□□ 1.05
KRT78Q8N1N4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRT78Q8N1N4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.61■■□□□ 1.05
KRT78Q8N1N4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRT78Q8N1N4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KRT78Q8N1N4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.61■■□□□ 1.05
KRT78Q8N1N4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.61■■□□□ 1.05
KRT78Q8N1N4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRT78Q8N1N4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KRT78Q8N1N4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.61■■□□□ 1.05
KRT78Q8N1N4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.61■■□□□ 1.05
KRT78Q8N1N4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRT78Q8N1N4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
KRT78Q8N1N4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRT78Q8N1N4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
KRT78Q8N1N4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
KRT78Q8N1N4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT78Q8N1N4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KRT78Q8N1N4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KRT78Q8N1N4 AC079630.1-202ENST00000618127 1840 ntBASIC21.6■■□□□ 1.05
KRT78Q8N1N4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.6■■□□□ 1.05
KRT78Q8N1N4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT78Q8N1N4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
KRT78Q8N1N4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.6■■□□□ 1.05
KRT78Q8N1N4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
KRT78Q8N1N4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
KRT78Q8N1N4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT78Q8N1N4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT78Q8N1N4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT78Q8N1N4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.59■■□□□ 1.05
KRT78Q8N1N4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT78Q8N1N4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT78Q8N1N4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
KRT78Q8N1N4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
KRT78Q8N1N4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
KRT78Q8N1N4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRT78Q8N1N4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
KRT78Q8N1N4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRT78Q8N1N4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRT78Q8N1N4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRT78Q8N1N4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.58■■□□□ 1.05
KRT78Q8N1N4 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.58■■□□□ 1.05
KRT78Q8N1N4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
KRT78Q8N1N4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.58■■□□□ 1.05
KRT78Q8N1N4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
KRT78Q8N1N4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.04
KRT78Q8N1N4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms