Protein–RNA interactions for Protein: Q0VF96

CGNL1, Cingulin-like protein 1, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGNL1Q0VF96 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CGNL1Q0VF96 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC30.71■■■□□ 2.51
CGNL1Q0VF96 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC30.71■■■□□ 2.51
CGNL1Q0VF96 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CGNL1Q0VF96 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CGNL1Q0VF96 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CGNL1Q0VF96 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CGNL1Q0VF96 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC30.7■■■□□ 2.5
CGNL1Q0VF96 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
CGNL1Q0VF96 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CGNL1Q0VF96 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
CGNL1Q0VF96 GTSE1-AS1-202ENST00000623117 1518 ntBASIC30.69■■■□□ 2.5
CGNL1Q0VF96 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
CGNL1Q0VF96 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
CGNL1Q0VF96 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
CGNL1Q0VF96 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
CGNL1Q0VF96 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC30.69■■■□□ 2.5
CGNL1Q0VF96 HES6-206ENST00000409574 738 ntTSL 2 BASIC30.69■■■□□ 2.5
CGNL1Q0VF96 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC30.69■■■□□ 2.5
CGNL1Q0VF96 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC30.69■■■□□ 2.5
CGNL1Q0VF96 AC136469.2-201ENST00000623944 1028 ntBASIC30.69■■■□□ 2.5
CGNL1Q0VF96 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
CGNL1Q0VF96 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
CGNL1Q0VF96 AC026271.2-201ENST00000428091 497 ntBASIC30.68■■■□□ 2.5
CGNL1Q0VF96 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC30.68■■■□□ 2.5
CGNL1Q0VF96 AP001330.3-201ENST00000520123 633 ntBASIC30.68■■■□□ 2.5
CGNL1Q0VF96 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
CGNL1Q0VF96 GRAMD4P4-201ENST00000613563 1115 ntBASIC30.68■■■□□ 2.5
CGNL1Q0VF96 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC30.68■■■□□ 2.5
CGNL1Q0VF96 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC30.68■■■□□ 2.5
CGNL1Q0VF96 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC30.67■■■□□ 2.5
CGNL1Q0VF96 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC30.67■■■□□ 2.5
CGNL1Q0VF96 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CGNL1Q0VF96 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC30.67■■■□□ 2.5
CGNL1Q0VF96 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
CGNL1Q0VF96 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CGNL1Q0VF96 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC30.67■■■□□ 2.5
CGNL1Q0VF96 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
CGNL1Q0VF96 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CGNL1Q0VF96 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CGNL1Q0VF96 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CGNL1Q0VF96 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC30.67■■■□□ 2.5
CGNL1Q0VF96 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC30.66■■■□□ 2.5
CGNL1Q0VF96 MIR939-201ENST00000401314 82 ntBASIC30.66■■■□□ 2.5
CGNL1Q0VF96 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC30.66■■■□□ 2.5
CGNL1Q0VF96 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
CGNL1Q0VF96 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CGNL1Q0VF96 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CGNL1Q0VF96 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CGNL1Q0VF96 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CGNL1Q0VF96 AF213884.3-201ENST00000563833 479 ntBASIC30.65■■■□□ 2.5
CGNL1Q0VF96 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
CGNL1Q0VF96 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC30.65■■■□□ 2.5
CGNL1Q0VF96 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CGNL1Q0VF96 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CGNL1Q0VF96 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CGNL1Q0VF96 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CGNL1Q0VF96 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CGNL1Q0VF96 pRNA.6-201ENST00000610482 90 ntBASIC30.64■■■□□ 2.5
CGNL1Q0VF96 pRNA.5-201ENST00000612139 90 ntBASIC30.64■■■□□ 2.5
CGNL1Q0VF96 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC30.64■■■□□ 2.5
CGNL1Q0VF96 pRNA.11-201ENST00000618423 90 ntBASIC30.64■■■□□ 2.5
CGNL1Q0VF96 pRNA.13-201ENST00000619112 90 ntBASIC30.64■■■□□ 2.5
CGNL1Q0VF96 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC30.64■■■□□ 2.5
CGNL1Q0VF96 AL136967.2-201ENST00000623968 743 ntBASIC30.64■■■□□ 2.5
CGNL1Q0VF96 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC30.64■■■□□ 2.5
CGNL1Q0VF96 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CGNL1Q0VF96 ABCB10P4-201ENST00000566803 2184 ntBASIC30.64■■■□□ 2.49
CGNL1Q0VF96 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
CGNL1Q0VF96 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC30.63■■■□□ 2.49
CGNL1Q0VF96 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CGNL1Q0VF96 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
CGNL1Q0VF96 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC30.63■■■□□ 2.49
CGNL1Q0VF96 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC30.62■■■□□ 2.49
CGNL1Q0VF96 FP325331.1-202ENST00000623531 1380 ntBASIC30.62■■■□□ 2.49
CGNL1Q0VF96 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CGNL1Q0VF96 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CGNL1Q0VF96 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CGNL1Q0VF96 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC30.62■■■□□ 2.49
CGNL1Q0VF96 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CGNL1Q0VF96 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC30.62■■■□□ 2.49
CGNL1Q0VF96 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CGNL1Q0VF96 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CGNL1Q0VF96 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CGNL1Q0VF96 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC30.61■■■□□ 2.49
CGNL1Q0VF96 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
CGNL1Q0VF96 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CGNL1Q0VF96 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC30.61■■■□□ 2.49
CGNL1Q0VF96 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC30.61■■■□□ 2.49
CGNL1Q0VF96 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
CGNL1Q0VF96 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CGNL1Q0VF96 AC144652.1-201ENST00000609974 1624 ntBASIC30.61■■■□□ 2.49
CGNL1Q0VF96 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CGNL1Q0VF96 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CGNL1Q0VF96 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CGNL1Q0VF96 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
CGNL1Q0VF96 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC30.6■■■□□ 2.49
CGNL1Q0VF96 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC30.6■■■□□ 2.49
CGNL1Q0VF96 LGR4-203ENST00000480977 492 ntTSL 2 BASIC30.6■■■□□ 2.49
CGNL1Q0VF96 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms