Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 SENP5-202ENST00000419026 973 ntTSL 3 BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 AC021242.3-201ENST00000607598 1377 ntBASIC16.26■□□□□ 0.19
TRGV1A0A0A0MS02 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV1A0A0A0MS02 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV1A0A0A0MS02 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV1A0A0A0MS02 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV1A0A0A0MS02 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV1A0A0A0MS02 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV1A0A0A0MS02 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.25■□□□□ 0.19
TRGV1A0A0A0MS02 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.25■□□□□ 0.19
TRGV1A0A0A0MS02 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.25■□□□□ 0.19
TRGV1A0A0A0MS02 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRGV1A0A0A0MS02 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
TRGV1A0A0A0MS02 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRGV1A0A0A0MS02 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRGV1A0A0A0MS02 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRGV1A0A0A0MS02 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 Z92544.1-202ENST00000571933 1220 ntBASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRGV1A0A0A0MS02 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV1A0A0A0MS02 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV1A0A0A0MS02 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV1A0A0A0MS02 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV1A0A0A0MS02 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV1A0A0A0MS02 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.23■□□□□ 0.19
TRGV1A0A0A0MS02 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV1A0A0A0MS02 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV1A0A0A0MS02 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV1A0A0A0MS02 AC239859.2-201ENST00000444165 318 ntBASIC16.23■□□□□ 0.19
TRGV1A0A0A0MS02 AC009299.2-201ENST00000482477 511 ntBASIC16.23■□□□□ 0.19
TRGV1A0A0A0MS02 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV1A0A0A0MS02 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV1A0A0A0MS02 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.23■□□□□ 0.19
TRGV1A0A0A0MS02 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRGV1A0A0A0MS02 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV1A0A0A0MS02 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV1A0A0A0MS02 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV1A0A0A0MS02 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV1A0A0A0MS02 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRGV1A0A0A0MS02 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRGV1A0A0A0MS02 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV1A0A0A0MS02 MIR4787-201ENST00000607364 84 ntBASIC16.22■□□□□ 0.19
TRGV1A0A0A0MS02 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.22■□□□□ 0.19
TRGV1A0A0A0MS02 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV1A0A0A0MS02 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.22■□□□□ 0.19
TRGV1A0A0A0MS02 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRGV1A0A0A0MS02 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.21■□□□□ 0.19
TRGV1A0A0A0MS02 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV1A0A0A0MS02 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV1A0A0A0MS02 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV1A0A0A0MS02 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
TRGV1A0A0A0MS02 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRGV1A0A0A0MS02 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV1A0A0A0MS02 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.21■□□□□ 0.19
TRGV1A0A0A0MS02 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRGV1A0A0A0MS02 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.21■□□□□ 0.19
TRGV1A0A0A0MS02 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRGV1A0A0A0MS02 MTDHP2-201ENST00000601468 714 ntBASIC16.21■□□□□ 0.19
TRGV1A0A0A0MS02 AL451085.2-201ENST00000605085 799 ntBASIC16.21■□□□□ 0.19
TRGV1A0A0A0MS02 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC16.21■□□□□ 0.19
TRGV1A0A0A0MS02 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms