Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
KRT28Q7Z3Y7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
KRT28Q7Z3Y7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC31.08■■■□□ 2.57
KRT28Q7Z3Y7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
KRT28Q7Z3Y7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
KRT28Q7Z3Y7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC31.08■■■□□ 2.57
KRT28Q7Z3Y7 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
KRT28Q7Z3Y7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
KRT28Q7Z3Y7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
KRT28Q7Z3Y7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC31.07■■■□□ 2.56
KRT28Q7Z3Y7 KRT18P14-201ENST00000534205 1250 ntBASIC31.07■■■□□ 2.56
KRT28Q7Z3Y7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
KRT28Q7Z3Y7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC31.07■■■□□ 2.56
KRT28Q7Z3Y7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
KRT28Q7Z3Y7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC31.06■■■□□ 2.56
KRT28Q7Z3Y7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
KRT28Q7Z3Y7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
KRT28Q7Z3Y7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC31.06■■■□□ 2.56
KRT28Q7Z3Y7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
KRT28Q7Z3Y7 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
KRT28Q7Z3Y7 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
KRT28Q7Z3Y7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
KRT28Q7Z3Y7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
KRT28Q7Z3Y7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC31.05■■■□□ 2.56
KRT28Q7Z3Y7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
KRT28Q7Z3Y7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
KRT28Q7Z3Y7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC31.05■■■□□ 2.56
KRT28Q7Z3Y7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC31.05■■■□□ 2.56
KRT28Q7Z3Y7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
KRT28Q7Z3Y7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC31.05■■■□□ 2.56
KRT28Q7Z3Y7 TERF1P2-201ENST00000583350 1212 ntBASIC31.05■■■□□ 2.56
KRT28Q7Z3Y7 AC141586.4-201ENST00000624558 1573 ntBASIC31.05■■■□□ 2.56
KRT28Q7Z3Y7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
KRT28Q7Z3Y7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
KRT28Q7Z3Y7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
KRT28Q7Z3Y7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
KRT28Q7Z3Y7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
KRT28Q7Z3Y7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
KRT28Q7Z3Y7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC31.03■■■□□ 2.56
KRT28Q7Z3Y7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
KRT28Q7Z3Y7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
KRT28Q7Z3Y7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
KRT28Q7Z3Y7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC31.03■■■□□ 2.56
KRT28Q7Z3Y7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
KRT28Q7Z3Y7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC31.02■■■□□ 2.56
KRT28Q7Z3Y7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC31.02■■■□□ 2.56
KRT28Q7Z3Y7 HLA-L-209ENST00000420110 1011 ntBASIC31.02■■■□□ 2.56
KRT28Q7Z3Y7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC31.02■■■□□ 2.56
KRT28Q7Z3Y7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC31.02■■■□□ 2.56
KRT28Q7Z3Y7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
KRT28Q7Z3Y7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
KRT28Q7Z3Y7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.55
KRT28Q7Z3Y7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
KRT28Q7Z3Y7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
KRT28Q7Z3Y7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC31.01■■■□□ 2.55
KRT28Q7Z3Y7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
KRT28Q7Z3Y7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
KRT28Q7Z3Y7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
KRT28Q7Z3Y7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC31■■■□□ 2.55
KRT28Q7Z3Y7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
KRT28Q7Z3Y7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC31■■■□□ 2.55
KRT28Q7Z3Y7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC31■■■□□ 2.55
KRT28Q7Z3Y7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC30.99■■■□□ 2.55
KRT28Q7Z3Y7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
KRT28Q7Z3Y7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
KRT28Q7Z3Y7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC30.99■■■□□ 2.55
KRT28Q7Z3Y7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
KRT28Q7Z3Y7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
KRT28Q7Z3Y7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC30.98■■■□□ 2.55
KRT28Q7Z3Y7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC30.98■■■□□ 2.55
KRT28Q7Z3Y7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC30.98■■■□□ 2.55
KRT28Q7Z3Y7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
KRT28Q7Z3Y7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
KRT28Q7Z3Y7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
KRT28Q7Z3Y7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC30.97■■■□□ 2.55
KRT28Q7Z3Y7 LINC02228-203ENST00000641970 1355 ntBASIC30.97■■■□□ 2.55
KRT28Q7Z3Y7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
KRT28Q7Z3Y7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC30.97■■■□□ 2.55
KRT28Q7Z3Y7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
KRT28Q7Z3Y7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC30.97■■■□□ 2.55
KRT28Q7Z3Y7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
KRT28Q7Z3Y7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC30.96■■■□□ 2.55
KRT28Q7Z3Y7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
KRT28Q7Z3Y7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC30.96■■■□□ 2.55
KRT28Q7Z3Y7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.55
KRT28Q7Z3Y7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
KRT28Q7Z3Y7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.95■■■□□ 2.55
KRT28Q7Z3Y7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
KRT28Q7Z3Y7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
KRT28Q7Z3Y7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.55
KRT28Q7Z3Y7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
KRT28Q7Z3Y7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC30.95■■■□□ 2.55
KRT28Q7Z3Y7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
KRT28Q7Z3Y7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC30.95■■■□□ 2.54
KRT28Q7Z3Y7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
KRT28Q7Z3Y7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
KRT28Q7Z3Y7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
KRT28Q7Z3Y7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
KRT28Q7Z3Y7 AC133637.1-201ENST00000624115 1537 ntBASIC30.93■■■□□ 2.54
KRT28Q7Z3Y7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms