Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 FP325331.1-202ENST00000623531 1380 ntBASIC16.82■□□□□ 0.28
CMC4P56277 SRD5A1P1-201ENST00000442297 786 ntBASIC16.82■□□□□ 0.28
CMC4P56277 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.82■□□□□ 0.28
CMC4P56277 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.82■□□□□ 0.28
CMC4P56277 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CMC4P56277 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CMC4P56277 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CMC4P56277 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMC4P56277 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMC4P56277 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CMC4P56277 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CMC4P56277 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMC4P56277 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.81■□□□□ 0.28
CMC4P56277 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CMC4P56277 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMC4P56277 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.81■□□□□ 0.28
CMC4P56277 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.81■□□□□ 0.28
CMC4P56277 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.81■□□□□ 0.28
CMC4P56277 DUX4L19-201ENST00000557448 1267 ntBASIC16.81■□□□□ 0.28
CMC4P56277 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CMC4P56277 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMC4P56277 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.81■□□□□ 0.28
CMC4P56277 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CMC4P56277 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMC4P56277 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.8■□□□□ 0.28
CMC4P56277 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMC4P56277 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMC4P56277 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.8■□□□□ 0.28
CMC4P56277 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CMC4P56277 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CMC4P56277 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CMC4P56277 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMC4P56277 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CMC4P56277 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMC4P56277 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CMC4P56277 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CMC4P56277 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CMC4P56277 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CMC4P56277 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMC4P56277 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.79■□□□□ 0.28
CMC4P56277 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CMC4P56277 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMC4P56277 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CMC4P56277 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMC4P56277 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMC4P56277 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMC4P56277 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMC4P56277 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CMC4P56277 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CMC4P56277 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CMC4P56277 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CMC4P56277 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.78■□□□□ 0.28
CMC4P56277 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CMC4P56277 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.78■□□□□ 0.28
CMC4P56277 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.78■□□□□ 0.28
CMC4P56277 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CMC4P56277 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CMC4P56277 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CMC4P56277 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CMC4P56277 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CMC4P56277 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CMC4P56277 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CMC4P56277 AC009102.2-201ENST00000606772 1639 ntBASIC16.78■□□□□ 0.28
CMC4P56277 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CMC4P56277 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CMC4P56277 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CMC4P56277 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CMC4P56277 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CMC4P56277 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CMC4P56277 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.77■□□□□ 0.28
CMC4P56277 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CMC4P56277 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.77■□□□□ 0.28
CMC4P56277 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.77■□□□□ 0.28
CMC4P56277 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.77■□□□□ 0.28
CMC4P56277 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CMC4P56277 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CMC4P56277 AC004812.2-201ENST00000611079 2094 ntBASIC16.77■□□□□ 0.27
CMC4P56277 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.77■□□□□ 0.27
CMC4P56277 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CMC4P56277 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CMC4P56277 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CMC4P56277 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CMC4P56277 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CMC4P56277 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CMC4P56277 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CMC4P56277 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CMC4P56277 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CMC4P56277 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CMC4P56277 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CMC4P56277 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CMC4P56277 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CMC4P56277 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CMC4P56277 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CMC4P56277 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CMC4P56277 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CMC4P56277 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CMC4P56277 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CMC4P56277 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CMC4P56277 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CMC4P56277 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms