Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.11■■□□□ 1.29
MT-CO1P00395 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
MT-CO1P00395 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.11■■□□□ 1.29
MT-CO1P00395 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
MT-CO1P00395 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.11■■□□□ 1.29
MT-CO1P00395 AC141586.4-201ENST00000624558 1573 ntBASIC23.1■■□□□ 1.29
MT-CO1P00395 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
MT-CO1P00395 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
MT-CO1P00395 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
MT-CO1P00395 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MT-CO1P00395 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.1■■□□□ 1.29
MT-CO1P00395 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MT-CO1P00395 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MT-CO1P00395 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.1■■□□□ 1.29
MT-CO1P00395 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MT-CO1P00395 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MT-CO1P00395 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
MT-CO1P00395 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MT-CO1P00395 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MT-CO1P00395 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
MT-CO1P00395 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
MT-CO1P00395 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.08■■□□□ 1.29
MT-CO1P00395 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.08■■□□□ 1.29
MT-CO1P00395 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
MT-CO1P00395 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
MT-CO1P00395 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
MT-CO1P00395 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
MT-CO1P00395 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.08■■□□□ 1.28
MT-CO1P00395 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
MT-CO1P00395 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
MT-CO1P00395 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
MT-CO1P00395 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
MT-CO1P00395 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MT-CO1P00395 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MT-CO1P00395 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
MT-CO1P00395 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.07■■□□□ 1.28
MT-CO1P00395 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MT-CO1P00395 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MT-CO1P00395 SRD5A1P1-201ENST00000442297 786 ntBASIC23.07■■□□□ 1.28
MT-CO1P00395 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
MT-CO1P00395 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.07■■□□□ 1.28
MT-CO1P00395 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.07■■□□□ 1.28
MT-CO1P00395 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.07■■□□□ 1.28
MT-CO1P00395 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.07■■□□□ 1.28
MT-CO1P00395 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
MT-CO1P00395 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.06■■□□□ 1.28
MT-CO1P00395 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.06■■□□□ 1.28
MT-CO1P00395 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.06■■□□□ 1.28
MT-CO1P00395 AC096631.2-201ENST00000436136 790 ntBASIC23.06■■□□□ 1.28
MT-CO1P00395 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.06■■□□□ 1.28
MT-CO1P00395 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
MT-CO1P00395 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
MT-CO1P00395 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
MT-CO1P00395 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
MT-CO1P00395 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
MT-CO1P00395 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MT-CO1P00395 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.05■■□□□ 1.28
MT-CO1P00395 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
MT-CO1P00395 ABCB10P4-201ENST00000566803 2184 ntBASIC23.05■■□□□ 1.28
MT-CO1P00395 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MT-CO1P00395 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.05■■□□□ 1.28
MT-CO1P00395 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.04■■□□□ 1.28
MT-CO1P00395 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.04■■□□□ 1.28
MT-CO1P00395 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.04■■□□□ 1.28
MT-CO1P00395 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
MT-CO1P00395 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.04■■□□□ 1.28
MT-CO1P00395 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
MT-CO1P00395 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.04■■□□□ 1.28
MT-CO1P00395 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
MT-CO1P00395 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.04■■□□□ 1.28
MT-CO1P00395 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
MT-CO1P00395 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
MT-CO1P00395 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.04■■□□□ 1.28
MT-CO1P00395 AC110285.6-201ENST00000617652 491 ntBASIC23.04■■□□□ 1.28
MT-CO1P00395 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
MT-CO1P00395 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
MT-CO1P00395 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
MT-CO1P00395 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
MT-CO1P00395 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
MT-CO1P00395 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
MT-CO1P00395 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
MT-CO1P00395 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
MT-CO1P00395 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
MT-CO1P00395 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
MT-CO1P00395 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
MT-CO1P00395 C17orf82-201ENST00000623772 1530 ntBASIC23.03■■□□□ 1.28
MT-CO1P00395 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
MT-CO1P00395 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
MT-CO1P00395 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.02■■□□□ 1.28
MT-CO1P00395 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.02■■□□□ 1.28
MT-CO1P00395 AL139246.5-201ENST00000606645 996 ntBASIC23.02■■□□□ 1.28
MT-CO1P00395 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
MT-CO1P00395 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
MT-CO1P00395 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
MT-CO1P00395 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
MT-CO1P00395 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.02■■□□□ 1.28
MT-CO1P00395 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
MT-CO1P00395 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
MT-CO1P00395 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
MT-CO1P00395 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms