Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC30.41■■■□□ 2.46
LTN1O94822 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
LTN1O94822 AK1-201ENST00000223836 736 ntTSL 3 BASIC30.41■■■□□ 2.46
LTN1O94822 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
LTN1O94822 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
LTN1O94822 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC30.41■■■□□ 2.46
LTN1O94822 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC30.41■■■□□ 2.46
LTN1O94822 pRNA.6-201ENST00000610482 90 ntBASIC30.41■■■□□ 2.46
LTN1O94822 pRNA.5-201ENST00000612139 90 ntBASIC30.41■■■□□ 2.46
LTN1O94822 pRNA.11-201ENST00000618423 90 ntBASIC30.41■■■□□ 2.46
LTN1O94822 pRNA.13-201ENST00000619112 90 ntBASIC30.41■■■□□ 2.46
LTN1O94822 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
LTN1O94822 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC30.4■■■□□ 2.46
LTN1O94822 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
LTN1O94822 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
LTN1O94822 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC30.4■■■□□ 2.46
LTN1O94822 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
LTN1O94822 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
LTN1O94822 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
LTN1O94822 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC30.39■■■□□ 2.46
LTN1O94822 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC30.39■■■□□ 2.46
LTN1O94822 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
LTN1O94822 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
LTN1O94822 PARL-206ENST00000435888 1098 ntTSL 5 BASIC30.39■■■□□ 2.46
LTN1O94822 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC30.39■■■□□ 2.46
LTN1O94822 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
LTN1O94822 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
LTN1O94822 IGHV3-19-201ENST00000521488 291 ntBASIC30.38■■■□□ 2.45
LTN1O94822 DUX4L2-201ENST00000561772 1275 ntBASIC30.38■■■□□ 2.45
LTN1O94822 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC30.38■■■□□ 2.45
LTN1O94822 DUX4L6-201ENST00000626483 1275 ntBASIC30.38■■■□□ 2.45
LTN1O94822 DUX4L1-201ENST00000627662 1275 ntBASIC30.38■■■□□ 2.45
LTN1O94822 DUX4L8-201ENST00000629013 1275 ntBASIC30.38■■■□□ 2.45
LTN1O94822 DUX4L3-201ENST00000630187 1275 ntBASIC30.38■■■□□ 2.45
LTN1O94822 DUX4L7-201ENST00000630678 1275 ntBASIC30.38■■■□□ 2.45
LTN1O94822 DUX4L5-201ENST00000630834 1275 ntBASIC30.38■■■□□ 2.45
LTN1O94822 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
LTN1O94822 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
LTN1O94822 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
LTN1O94822 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
LTN1O94822 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
LTN1O94822 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC30.38■■■□□ 2.45
LTN1O94822 AICDA-202ENST00000537228 667 ntTSL 5 BASIC30.38■■■□□ 2.45
LTN1O94822 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
LTN1O94822 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
LTN1O94822 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
LTN1O94822 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC30.36■■■□□ 2.45
LTN1O94822 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
LTN1O94822 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
LTN1O94822 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC30.36■■■□□ 2.45
LTN1O94822 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
LTN1O94822 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
LTN1O94822 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC30.35■■■□□ 2.45
LTN1O94822 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC30.35■■■□□ 2.45
LTN1O94822 AC010525.1-201ENST00000585559 441 ntBASIC30.35■■■□□ 2.45
LTN1O94822 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC30.35■■■□□ 2.45
LTN1O94822 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
LTN1O94822 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
LTN1O94822 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
LTN1O94822 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC30.34■■■□□ 2.45
LTN1O94822 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
LTN1O94822 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
LTN1O94822 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC30.34■■■□□ 2.45
LTN1O94822 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
LTN1O94822 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
LTN1O94822 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
LTN1O94822 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
LTN1O94822 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
LTN1O94822 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
LTN1O94822 YBX1P1-201ENST00000445822 960 ntBASIC30.33■■■□□ 2.45
LTN1O94822 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
LTN1O94822 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
LTN1O94822 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC30.32■■■□□ 2.44
LTN1O94822 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.32■■■□□ 2.44
LTN1O94822 RAB43-208ENST00000615093 783 ntTSL 5 BASIC30.32■■■□□ 2.44
LTN1O94822 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
LTN1O94822 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
LTN1O94822 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
LTN1O94822 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC30.31■■■□□ 2.44
LTN1O94822 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC30.31■■■□□ 2.44
LTN1O94822 AC090192.1-201ENST00000517740 490 ntBASIC30.31■■■□□ 2.44
LTN1O94822 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
LTN1O94822 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC30.31■■■□□ 2.44
LTN1O94822 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
LTN1O94822 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
LTN1O94822 AC141586.4-201ENST00000624558 1573 ntBASIC30.31■■■□□ 2.44
LTN1O94822 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
LTN1O94822 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC30.31■■■□□ 2.44
LTN1O94822 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
LTN1O94822 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC30.3■■■□□ 2.44
LTN1O94822 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
LTN1O94822 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
LTN1O94822 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
LTN1O94822 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
LTN1O94822 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
LTN1O94822 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC30.3■■■□□ 2.44
LTN1O94822 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
LTN1O94822 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
LTN1O94822 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
LTN1O94822 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms