Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NDUFA1O15239 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFA1O15239 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC15.41■□□□□ 0.06
NDUFA1O15239 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA1O15239 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC15.41■□□□□ 0.06
NDUFA1O15239 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.41■□□□□ 0.06
NDUFA1O15239 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA1O15239 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA1O15239 USP48-205ENST00000421625 2818 ntTSL 2 BASIC15.41■□□□□ 0.06
NDUFA1O15239 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA1O15239 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA1O15239 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC15.41■□□□□ 0.06
NDUFA1O15239 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.41■□□□□ 0.06
NDUFA1O15239 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA1O15239 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA1O15239 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
NDUFA1O15239 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NDUFA1O15239 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC15.41■□□□□ 0.06
NDUFA1O15239 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA1O15239 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA1O15239 AL024507.2-201ENST00000606070 2574 ntBASIC15.41■□□□□ 0.06
NDUFA1O15239 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA1O15239 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC15.41■□□□□ 0.06
NDUFA1O15239 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFA1O15239 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA1O15239 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA1O15239 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA1O15239 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA1O15239 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA1O15239 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA1O15239 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA1O15239 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFA1O15239 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NDUFA1O15239 AC026202.3-201ENST00000600805 1127 ntBASIC15.4■□□□□ 0.06
NDUFA1O15239 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NDUFA1O15239 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NDUFA1O15239 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.4■□□□□ 0.06
NDUFA1O15239 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NDUFA1O15239 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
NDUFA1O15239 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA1O15239 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA1O15239 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
NDUFA1O15239 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA1O15239 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NDUFA1O15239 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.39■□□□□ 0.05
NDUFA1O15239 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA1O15239 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA1O15239 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NDUFA1O15239 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA1O15239 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA1O15239 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NDUFA1O15239 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA1O15239 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA1O15239 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDUFA1O15239 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
NDUFA1O15239 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA1O15239 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA1O15239 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA1O15239 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA1O15239 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA1O15239 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA1O15239 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC15.38■□□□□ 0.05
NDUFA1O15239 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NDUFA1O15239 MBP-237ENST00000579129 1052 ntTSL 5 BASIC15.38■□□□□ 0.05
NDUFA1O15239 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC15.38■□□□□ 0.05
NDUFA1O15239 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA1O15239 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA1O15239 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA1O15239 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA1O15239 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDUFA1O15239 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA1O15239 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA1O15239 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC15.37■□□□□ 0.05
NDUFA1O15239 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.37■□□□□ 0.05
NDUFA1O15239 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA1O15239 AC007375.3-201ENST00000600936 2314 ntBASIC15.37■□□□□ 0.05
NDUFA1O15239 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA1O15239 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA1O15239 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
NDUFA1O15239 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC15.37■□□□□ 0.05
NDUFA1O15239 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC15.37■□□□□ 0.05
NDUFA1O15239 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NDUFA1O15239 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC15.37■□□□□ 0.05
NDUFA1O15239 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA1O15239 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA1O15239 AC242852.2-201ENST00000615738 1807 ntBASIC15.36■□□□□ 0.05
NDUFA1O15239 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC15.36■□□□□ 0.05
NDUFA1O15239 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
NDUFA1O15239 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
NDUFA1O15239 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC15.36■□□□□ 0.05
NDUFA1O15239 AC133552.2-201ENST00000619106 1032 ntBASIC15.36■□□□□ 0.05
NDUFA1O15239 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA1O15239 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
NDUFA1O15239 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA1O15239 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC15.36■□□□□ 0.05
NDUFA1O15239 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA1O15239 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA1O15239 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NDUFA1O15239 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NDUFA1O15239 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms