Protein–RNA interactions for Protein: Q9Y5E4

PCDHB5, Protocadherin beta-5, humanhuman

Predictions only

Length 795 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5Q9Y5E4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHB5Q9Y5E4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB5Q9Y5E4 SYT6-210ENST00000641643 1587 ntBASIC23.99■■□□□ 1.43
PCDHB5Q9Y5E4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
PCDHB5Q9Y5E4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHB5Q9Y5E4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB5Q9Y5E4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.98■■□□□ 1.43
PCDHB5Q9Y5E4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
PCDHB5Q9Y5E4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDHB5Q9Y5E4 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDHB5Q9Y5E4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.98■■□□□ 1.43
PCDHB5Q9Y5E4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDHB5Q9Y5E4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB5Q9Y5E4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.98■■□□□ 1.43
PCDHB5Q9Y5E4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHB5Q9Y5E4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB5Q9Y5E4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB5Q9Y5E4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB5Q9Y5E4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
PCDHB5Q9Y5E4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHB5Q9Y5E4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB5Q9Y5E4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB5Q9Y5E4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB5Q9Y5E4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB5Q9Y5E4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.96■■□□□ 1.43
PCDHB5Q9Y5E4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB5Q9Y5E4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB5Q9Y5E4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.96■■□□□ 1.43
PCDHB5Q9Y5E4 AC241377.3-202ENST00000626088 1088 ntBASIC23.96■■□□□ 1.43
PCDHB5Q9Y5E4 AC241585.3-202ENST00000628937 1088 ntBASIC23.96■■□□□ 1.43
PCDHB5Q9Y5E4 AC245100.8-202ENST00000629247 1058 ntBASIC23.96■■□□□ 1.43
PCDHB5Q9Y5E4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB5Q9Y5E4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB5Q9Y5E4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
PCDHB5Q9Y5E4 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHB5Q9Y5E4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
PCDHB5Q9Y5E4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
PCDHB5Q9Y5E4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
PCDHB5Q9Y5E4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.95■■□□□ 1.43
PCDHB5Q9Y5E4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB5Q9Y5E4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.95■■□□□ 1.42
PCDHB5Q9Y5E4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB5Q9Y5E4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB5Q9Y5E4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.95■■□□□ 1.42
PCDHB5Q9Y5E4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.95■■□□□ 1.42
PCDHB5Q9Y5E4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.95■■□□□ 1.42
PCDHB5Q9Y5E4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.95■■□□□ 1.42
PCDHB5Q9Y5E4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB5Q9Y5E4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.95■■□□□ 1.42
PCDHB5Q9Y5E4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.95■■□□□ 1.42
PCDHB5Q9Y5E4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
PCDHB5Q9Y5E4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
PCDHB5Q9Y5E4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHB5Q9Y5E4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.94■■□□□ 1.42
PCDHB5Q9Y5E4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.94■■□□□ 1.42
PCDHB5Q9Y5E4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHB5Q9Y5E4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHB5Q9Y5E4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PCDHB5Q9Y5E4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHB5Q9Y5E4 SERBP1P1-201ENST00000396021 1160 ntBASIC23.93■■□□□ 1.42
PCDHB5Q9Y5E4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
PCDHB5Q9Y5E4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHB5Q9Y5E4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PCDHB5Q9Y5E4 AC141586.4-201ENST00000624558 1573 ntBASIC23.92■■□□□ 1.42
PCDHB5Q9Y5E4 EDA-201ENST00000338901 1233 ntBASIC23.92■■□□□ 1.42
PCDHB5Q9Y5E4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB5Q9Y5E4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PCDHB5Q9Y5E4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB5Q9Y5E4 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.91■■□□□ 1.42
PCDHB5Q9Y5E4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB5Q9Y5E4 AC142381.2-201ENST00000566120 298 ntBASIC23.91■■□□□ 1.42
PCDHB5Q9Y5E4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PCDHB5Q9Y5E4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB5Q9Y5E4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.9■■□□□ 1.42
PCDHB5Q9Y5E4 AL138724.1-201ENST00000606771 1088 ntBASIC23.9■■□□□ 1.42
PCDHB5Q9Y5E4 AL031432.3-201ENST00000607698 485 ntBASIC23.9■■□□□ 1.42
PCDHB5Q9Y5E4 AL355001.2-201ENST00000620617 1191 ntBASIC23.9■■□□□ 1.42
PCDHB5Q9Y5E4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.9■■□□□ 1.42
PCDHB5Q9Y5E4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.9■■□□□ 1.42
PCDHB5Q9Y5E4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB5Q9Y5E4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PCDHB5Q9Y5E4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
PCDHB5Q9Y5E4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHB5Q9Y5E4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHB5Q9Y5E4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHB5Q9Y5E4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHB5Q9Y5E4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHB5Q9Y5E4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHB5Q9Y5E4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
PCDHB5Q9Y5E4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.89■■□□□ 1.41
PCDHB5Q9Y5E4 AC009086.3-201ENST00000623486 1008 ntBASIC23.89■■□□□ 1.41
PCDHB5Q9Y5E4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.89■■□□□ 1.41
PCDHB5Q9Y5E4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHB5Q9Y5E4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PCDHB5Q9Y5E4 LINC01124-201ENST00000409786 2117 ntBASIC23.89■■□□□ 1.41
PCDHB5Q9Y5E4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB5Q9Y5E4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.88■■□□□ 1.41
PCDHB5Q9Y5E4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB5Q9Y5E4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB5Q9Y5E4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms