Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH20Q9HBT6 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH20Q9HBT6 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH20Q9HBT6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.77■□□□□ 0.76
CDH20Q9HBT6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH20Q9HBT6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH20Q9HBT6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH20Q9HBT6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH20Q9HBT6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.77■□□□□ 0.76
CDH20Q9HBT6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH20Q9HBT6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH20Q9HBT6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH20Q9HBT6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CDH20Q9HBT6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH20Q9HBT6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CDH20Q9HBT6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH20Q9HBT6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH20Q9HBT6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH20Q9HBT6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH20Q9HBT6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH20Q9HBT6 AC004812.2-201ENST00000611079 2094 ntBASIC19.75■□□□□ 0.75
CDH20Q9HBT6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDH20Q9HBT6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH20Q9HBT6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH20Q9HBT6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.75■□□□□ 0.75
CDH20Q9HBT6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH20Q9HBT6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH20Q9HBT6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH20Q9HBT6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH20Q9HBT6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH20Q9HBT6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH20Q9HBT6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH20Q9HBT6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH20Q9HBT6 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH20Q9HBT6 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH20Q9HBT6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
CDH20Q9HBT6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CDH20Q9HBT6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH20Q9HBT6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CDH20Q9HBT6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CDH20Q9HBT6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.73■□□□□ 0.75
CDH20Q9HBT6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH20Q9HBT6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH20Q9HBT6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CDH20Q9HBT6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.73■□□□□ 0.75
CDH20Q9HBT6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH20Q9HBT6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
CDH20Q9HBT6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CDH20Q9HBT6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
CDH20Q9HBT6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.72■□□□□ 0.75
CDH20Q9HBT6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH20Q9HBT6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH20Q9HBT6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH20Q9HBT6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH20Q9HBT6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH20Q9HBT6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CDH20Q9HBT6 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDH20Q9HBT6 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.72■□□□□ 0.75
CDH20Q9HBT6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.72■□□□□ 0.75
CDH20Q9HBT6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDH20Q9HBT6 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CDH20Q9HBT6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH20Q9HBT6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH20Q9HBT6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH20Q9HBT6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDH20Q9HBT6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDH20Q9HBT6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.71■□□□□ 0.75
CDH20Q9HBT6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH20Q9HBT6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH20Q9HBT6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.71■□□□□ 0.75
CDH20Q9HBT6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDH20Q9HBT6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDH20Q9HBT6 ABCB10P4-201ENST00000566803 2184 ntBASIC19.7■□□□□ 0.74
CDH20Q9HBT6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH20Q9HBT6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH20Q9HBT6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.7■□□□□ 0.74
CDH20Q9HBT6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CDH20Q9HBT6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH20Q9HBT6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.7■□□□□ 0.74
CDH20Q9HBT6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH20Q9HBT6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH20Q9HBT6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH20Q9HBT6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.7■□□□□ 0.74
CDH20Q9HBT6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDH20Q9HBT6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDH20Q9HBT6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH20Q9HBT6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH20Q9HBT6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH20Q9HBT6 AL356740.2-201ENST00000601559 647 ntBASIC19.69■□□□□ 0.74
CDH20Q9HBT6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.69■□□□□ 0.74
CDH20Q9HBT6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH20Q9HBT6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH20Q9HBT6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDH20Q9HBT6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH20Q9HBT6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH20Q9HBT6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.68■□□□□ 0.74
CDH20Q9HBT6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH20Q9HBT6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDH20Q9HBT6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDH20Q9HBT6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms