Protein–RNA interactions for Protein: Q9H8X3

LINC00574, Putative uncharacterized protein LINC00574, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00574Q9H8X3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LINC00574Q9H8X3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
LINC00574Q9H8X3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC00574Q9H8X3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.61■□□□□ 0.57
LINC00574Q9H8X3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.61■□□□□ 0.57
LINC00574Q9H8X3 AC005703.6-201ENST00000623265 1329 ntBASIC18.61■□□□□ 0.57
LINC00574Q9H8X3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LINC00574Q9H8X3 AC239859.2-201ENST00000444165 318 ntBASIC18.61■□□□□ 0.57
LINC00574Q9H8X3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC00574Q9H8X3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LINC00574Q9H8X3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LINC00574Q9H8X3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC00574Q9H8X3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.6■□□□□ 0.57
LINC00574Q9H8X3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00574Q9H8X3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00574Q9H8X3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00574Q9H8X3 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.59■□□□□ 0.57
LINC00574Q9H8X3 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.59■□□□□ 0.57
LINC00574Q9H8X3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00574Q9H8X3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00574Q9H8X3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00574Q9H8X3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00574Q9H8X3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
LINC00574Q9H8X3 DUSP8P3-201ENST00000399571 1760 ntBASIC18.59■□□□□ 0.57
LINC00574Q9H8X3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00574Q9H8X3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00574Q9H8X3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LINC00574Q9H8X3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LINC00574Q9H8X3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LINC00574Q9H8X3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.58■□□□□ 0.56
LINC00574Q9H8X3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
LINC00574Q9H8X3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.58■□□□□ 0.56
LINC00574Q9H8X3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.58■□□□□ 0.56
LINC00574Q9H8X3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
LINC00574Q9H8X3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00574Q9H8X3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00574Q9H8X3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00574Q9H8X3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LINC00574Q9H8X3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.57■□□□□ 0.56
LINC00574Q9H8X3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LINC00574Q9H8X3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00574Q9H8X3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.57■□□□□ 0.56
LINC00574Q9H8X3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.57■□□□□ 0.56
LINC00574Q9H8X3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00574Q9H8X3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.57■□□□□ 0.56
LINC00574Q9H8X3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00574Q9H8X3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
LINC00574Q9H8X3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
LINC00574Q9H8X3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.57■□□□□ 0.56
LINC00574Q9H8X3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.57■□□□□ 0.56
LINC00574Q9H8X3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00574Q9H8X3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LINC00574Q9H8X3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
LINC00574Q9H8X3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LINC00574Q9H8X3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
LINC00574Q9H8X3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00574Q9H8X3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.56■□□□□ 0.56
LINC00574Q9H8X3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00574Q9H8X3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00574Q9H8X3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00574Q9H8X3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00574Q9H8X3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LINC00574Q9H8X3 AL035685.1-201ENST00000636663 812 ntBASIC18.55■□□□□ 0.56
LINC00574Q9H8X3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00574Q9H8X3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC00574Q9H8X3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00574Q9H8X3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00574Q9H8X3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00574Q9H8X3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.55■□□□□ 0.56
LINC00574Q9H8X3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LINC00574Q9H8X3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00574Q9H8X3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00574Q9H8X3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC00574Q9H8X3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00574Q9H8X3 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC00574Q9H8X3 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.54■□□□□ 0.56
LINC00574Q9H8X3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.54■□□□□ 0.56
LINC00574Q9H8X3 MTDHP2-201ENST00000601468 714 ntBASIC18.54■□□□□ 0.56
LINC00574Q9H8X3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00574Q9H8X3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.54■□□□□ 0.56
LINC00574Q9H8X3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms