Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
PCDH11XQ9BZA7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PCDH11XQ9BZA7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PCDH11XQ9BZA7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
PCDH11XQ9BZA7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC29.81■■■□□ 2.36
PCDH11XQ9BZA7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC29.81■■■□□ 2.36
PCDH11XQ9BZA7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
PCDH11XQ9BZA7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
PCDH11XQ9BZA7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PCDH11XQ9BZA7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PCDH11XQ9BZA7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC29.8■■■□□ 2.36
PCDH11XQ9BZA7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC29.8■■■□□ 2.36
PCDH11XQ9BZA7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
PCDH11XQ9BZA7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC29.79■■■□□ 2.36
PCDH11XQ9BZA7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
PCDH11XQ9BZA7 AC034268.1-201ENST00000441047 882 ntBASIC29.79■■■□□ 2.36
PCDH11XQ9BZA7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
PCDH11XQ9BZA7 AC126544.1-201ENST00000580842 1059 ntBASIC29.79■■■□□ 2.36
PCDH11XQ9BZA7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
PCDH11XQ9BZA7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC29.79■■■□□ 2.36
PCDH11XQ9BZA7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC29.79■■■□□ 2.36
PCDH11XQ9BZA7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
PCDH11XQ9BZA7 HLA-L-211ENST00000482052 1765 ntBASIC29.78■■■□□ 2.36
PCDH11XQ9BZA7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
PCDH11XQ9BZA7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
PCDH11XQ9BZA7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC29.78■■■□□ 2.36
PCDH11XQ9BZA7 YBX1P1-201ENST00000445822 960 ntBASIC29.78■■■□□ 2.36
PCDH11XQ9BZA7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC29.78■■■□□ 2.36
PCDH11XQ9BZA7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC29.78■■■□□ 2.36
PCDH11XQ9BZA7 AC145676.1-201ENST00000514988 2004 ntBASIC29.78■■■□□ 2.36
PCDH11XQ9BZA7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC29.78■■■□□ 2.36
PCDH11XQ9BZA7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PCDH11XQ9BZA7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PCDH11XQ9BZA7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC29.77■■■□□ 2.36
PCDH11XQ9BZA7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
PCDH11XQ9BZA7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
PCDH11XQ9BZA7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC29.77■■■□□ 2.36
PCDH11XQ9BZA7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC29.77■■■□□ 2.36
PCDH11XQ9BZA7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
PCDH11XQ9BZA7 AC091060.1-201ENST00000623524 1766 ntBASIC29.76■■■□□ 2.36
PCDH11XQ9BZA7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.36
PCDH11XQ9BZA7 SLC47A1P1-202ENST00000449666 945 ntBASIC29.76■■■□□ 2.36
PCDH11XQ9BZA7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
PCDH11XQ9BZA7 ALDH1A3-203ENST00000557963 1670 ntBASIC29.76■■■□□ 2.35
PCDH11XQ9BZA7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
PCDH11XQ9BZA7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
PCDH11XQ9BZA7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
PCDH11XQ9BZA7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC29.76■■■□□ 2.35
PCDH11XQ9BZA7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC29.75■■■□□ 2.35
PCDH11XQ9BZA7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC29.75■■■□□ 2.35
PCDH11XQ9BZA7 AL031602.1-201ENST00000633169 911 ntBASIC29.75■■■□□ 2.35
PCDH11XQ9BZA7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
PCDH11XQ9BZA7 TSPY26P-201ENST00000476365 1326 ntBASIC29.75■■■□□ 2.35
PCDH11XQ9BZA7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
PCDH11XQ9BZA7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
PCDH11XQ9BZA7 AC141586.4-201ENST00000624558 1573 ntBASIC29.74■■■□□ 2.35
PCDH11XQ9BZA7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
PCDH11XQ9BZA7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
PCDH11XQ9BZA7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
PCDH11XQ9BZA7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC29.74■■■□□ 2.35
PCDH11XQ9BZA7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC29.74■■■□□ 2.35
PCDH11XQ9BZA7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
PCDH11XQ9BZA7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCDH11XQ9BZA7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC29.73■■■□□ 2.35
PCDH11XQ9BZA7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC29.73■■■□□ 2.35
PCDH11XQ9BZA7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCDH11XQ9BZA7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCDH11XQ9BZA7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCDH11XQ9BZA7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC29.73■■■□□ 2.35
PCDH11XQ9BZA7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCDH11XQ9BZA7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC29.73■■■□□ 2.35
PCDH11XQ9BZA7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
PCDH11XQ9BZA7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC29.72■■■□□ 2.35
PCDH11XQ9BZA7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC29.72■■■□□ 2.35
PCDH11XQ9BZA7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
PCDH11XQ9BZA7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PCDH11XQ9BZA7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PCDH11XQ9BZA7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
PCDH11XQ9BZA7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
PCDH11XQ9BZA7 KRT18P5-201ENST00000436075 1291 ntBASIC29.71■■■□□ 2.35
PCDH11XQ9BZA7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
PCDH11XQ9BZA7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
PCDH11XQ9BZA7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC29.71■■■□□ 2.35
PCDH11XQ9BZA7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
PCDH11XQ9BZA7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
PCDH11XQ9BZA7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC29.71■■■□□ 2.35
PCDH11XQ9BZA7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
PCDH11XQ9BZA7 NME4-202ENST00000382940 766 ntTSL 3 BASIC29.71■■■□□ 2.35
PCDH11XQ9BZA7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC29.71■■■□□ 2.35
PCDH11XQ9BZA7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC29.71■■■□□ 2.35
PCDH11XQ9BZA7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC29.71■■■□□ 2.35
PCDH11XQ9BZA7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC29.71■■■□□ 2.35
PCDH11XQ9BZA7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
PCDH11XQ9BZA7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC29.7■■■□□ 2.35
PCDH11XQ9BZA7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC29.7■■■□□ 2.34
PCDH11XQ9BZA7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC29.7■■■□□ 2.34
PCDH11XQ9BZA7 AC027612.3-201ENST00000413684 1047 ntBASIC29.7■■■□□ 2.34
PCDH11XQ9BZA7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC29.7■■■□□ 2.34
PCDH11XQ9BZA7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC29.7■■■□□ 2.34
PCDH11XQ9BZA7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC29.7■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms