Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF2Q99496 AC139795.1-202ENST00000500444 432 ntBASIC17.91■□□□□ 0.46
RNF2Q99496 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF2Q99496 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF2Q99496 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF2Q99496 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF2Q99496 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF2Q99496 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF2Q99496 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF2Q99496 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF2Q99496 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF2Q99496 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF2Q99496 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF2Q99496 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF2Q99496 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF2Q99496 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF2Q99496 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF2Q99496 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF2Q99496 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF2Q99496 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF2Q99496 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF2Q99496 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF2Q99496 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF2Q99496 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF2Q99496 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF2Q99496 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF2Q99496 AL161729.1-201ENST00000604104 1402 ntBASIC17.89■□□□□ 0.46
RNF2Q99496 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RNF2Q99496 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF2Q99496 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF2Q99496 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF2Q99496 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF2Q99496 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF2Q99496 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.89■□□□□ 0.45
RNF2Q99496 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF2Q99496 AL033527.3-201ENST00000566366 1196 ntBASIC17.89■□□□□ 0.45
RNF2Q99496 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF2Q99496 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.89■□□□□ 0.45
RNF2Q99496 BHLHE23-202ENST00000612929 1109 ntBASIC17.89■□□□□ 0.45
RNF2Q99496 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.89■□□□□ 0.45
RNF2Q99496 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RNF2Q99496 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RNF2Q99496 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
RNF2Q99496 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF2Q99496 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF2Q99496 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF2Q99496 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RNF2Q99496 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF2Q99496 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF2Q99496 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
RNF2Q99496 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF2Q99496 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF2Q99496 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RNF2Q99496 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF2Q99496 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF2Q99496 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RNF2Q99496 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.88■□□□□ 0.45
RNF2Q99496 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.88■□□□□ 0.45
RNF2Q99496 C9orf163-202ENST00000624034 2573 ntBASIC17.88■□□□□ 0.45
RNF2Q99496 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF2Q99496 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF2Q99496 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF2Q99496 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RNF2Q99496 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF2Q99496 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.87■□□□□ 0.45
RNF2Q99496 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF2Q99496 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RNF2Q99496 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF2Q99496 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF2Q99496 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
RNF2Q99496 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF2Q99496 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF2Q99496 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF2Q99496 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RNF2Q99496 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.87■□□□□ 0.45
RNF2Q99496 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF2Q99496 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RNF2Q99496 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.87■□□□□ 0.45
RNF2Q99496 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF2Q99496 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF2Q99496 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF2Q99496 ANOS2P-203ENST00000472227 1816 ntBASIC17.86■□□□□ 0.45
RNF2Q99496 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF2Q99496 AC233723.2-201ENST00000623798 2106 ntBASIC17.86■□□□□ 0.45
RNF2Q99496 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF2Q99496 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF2Q99496 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.86■□□□□ 0.45
RNF2Q99496 LONRF2P2-201ENST00000439212 571 ntBASIC17.86■□□□□ 0.45
RNF2Q99496 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF2Q99496 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF2Q99496 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF2Q99496 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RNF2Q99496 AC092068.2-201ENST00000590491 1708 ntBASIC17.86■□□□□ 0.45
RNF2Q99496 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF2Q99496 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC17.86■□□□□ 0.45
RNF2Q99496 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RNF2Q99496 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RNF2Q99496 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RNF2Q99496 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RNF2Q99496 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms