Protein–RNA interactions for Protein: Q96A99

PTX4, Pentraxin-4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4Q96A99 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.39■□□□□ 0.69
PTX4Q96A99 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PTX4Q96A99 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTX4Q96A99 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTX4Q96A99 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTX4Q96A99 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTX4Q96A99 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTX4Q96A99 AC242852.2-201ENST00000615738 1807 ntBASIC19.38■□□□□ 0.69
PTX4Q96A99 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PTX4Q96A99 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
PTX4Q96A99 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
PTX4Q96A99 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTX4Q96A99 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTX4Q96A99 ALDH1A3-203ENST00000557963 1670 ntBASIC19.37■□□□□ 0.69
PTX4Q96A99 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTX4Q96A99 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.37■□□□□ 0.69
PTX4Q96A99 AC009831.1-201ENST00000580420 1582 ntBASIC19.37■□□□□ 0.69
PTX4Q96A99 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTX4Q96A99 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTX4Q96A99 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTX4Q96A99 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTX4Q96A99 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTX4Q96A99 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.37■□□□□ 0.69
PTX4Q96A99 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PTX4Q96A99 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTX4Q96A99 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTX4Q96A99 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.37■□□□□ 0.69
PTX4Q96A99 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTX4Q96A99 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTX4Q96A99 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTX4Q96A99 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTX4Q96A99 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTX4Q96A99 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTX4Q96A99 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PTX4Q96A99 AC087393.1-201ENST00000582896 145 ntBASIC19.36■□□□□ 0.69
PTX4Q96A99 AC133552.2-201ENST00000619106 1032 ntBASIC19.36■□□□□ 0.69
PTX4Q96A99 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.36■□□□□ 0.69
PTX4Q96A99 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTX4Q96A99 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PTX4Q96A99 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.36■□□□□ 0.69
PTX4Q96A99 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.36■□□□□ 0.69
PTX4Q96A99 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.35■□□□□ 0.69
PTX4Q96A99 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTX4Q96A99 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.35■□□□□ 0.69
PTX4Q96A99 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.35■□□□□ 0.69
PTX4Q96A99 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PTX4Q96A99 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.35■□□□□ 0.69
PTX4Q96A99 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTX4Q96A99 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTX4Q96A99 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.35■□□□□ 0.69
PTX4Q96A99 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTX4Q96A99 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTX4Q96A99 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTX4Q96A99 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTX4Q96A99 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTX4Q96A99 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.34■□□□□ 0.69
PTX4Q96A99 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.34■□□□□ 0.69
PTX4Q96A99 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
PTX4Q96A99 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.34■□□□□ 0.69
PTX4Q96A99 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTX4Q96A99 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTX4Q96A99 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PTX4Q96A99 AC018755.3-202ENST00000596210 929 ntBASIC19.34■□□□□ 0.69
PTX4Q96A99 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTX4Q96A99 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.34■□□□□ 0.69
PTX4Q96A99 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTX4Q96A99 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTX4Q96A99 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTX4Q96A99 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTX4Q96A99 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PTX4Q96A99 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.33■□□□□ 0.68
PTX4Q96A99 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTX4Q96A99 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTX4Q96A99 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTX4Q96A99 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTX4Q96A99 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTX4Q96A99 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTX4Q96A99 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTX4Q96A99 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PTX4Q96A99 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTX4Q96A99 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTX4Q96A99 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTX4Q96A99 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTX4Q96A99 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTX4Q96A99 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PTX4Q96A99 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PTX4Q96A99 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.32■□□□□ 0.68
PTX4Q96A99 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTX4Q96A99 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
PTX4Q96A99 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTX4Q96A99 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTX4Q96A99 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTX4Q96A99 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTX4Q96A99 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.31■□□□□ 0.68
PTX4Q96A99 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTX4Q96A99 RNF126P1-201ENST00000567452 1320 ntBASIC19.31■□□□□ 0.68
PTX4Q96A99 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PTX4Q96A99 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PTX4Q96A99 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PTX4Q96A99 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms