Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 HNRNPA1P5-201ENST00000558213 966 ntBASIC13.19□□□□□ -0.39e-8■■■■□ 21.6
CSTF2P33240 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC12.7□□□□□ -0.388e-7■■■■□ 21.6
CSTF2P33240 CRYBB2P1-201ENST00000354451 1560 ntTSL 1 (best)12.58□□□□□ -0.48e-7■■■■□ 21.6
CSTF2P33240 CUL1-203ENST00000602748 3054 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.699e-8■■■■□ 21.6
CSTF2P33240 CUL1-202ENST00000409469 2857 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.959e-8■■■■□ 21.6
CSTF2P33240 SLC38A2-201ENST00000256689 4888 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.979e-18■■■■□ 21.6
CSTF2P33240 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.29e-8■■■■□ 21.6
CSTF2P33240 MAP2K5-205ENST00000439036 429 ntTSL 36.23□□□□□ -1.419e-8■■■■□ 21.6
CSTF2P33240 MAP2K5-212ENST00000560591 1457 ntTSL 36.09□□□□□ -1.439e-8■■■■□ 21.6
CSTF2P33240 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.04□□□□□ -1.449e-8■■■■□ 21.6
CSTF2P33240 MAP2K5-210ENST00000559262 814 ntTSL 55.81□□□□□ -1.489e-8■■■■□ 21.6
CSTF2P33240 SLC38A2-208ENST00000549258 4384 ntTSL 24.24□□□□□ -1.739e-18■■■■□ 21.6
CSTF2P33240 LINC01410-201ENST00000424345 2877 ntTSL 1 (best) BASIC8.83□□□□□ -12e-7■■■■□ 21.5
CSTF2P33240 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.282e-6■■■■□ 21.5
CSTF2P33240 PACRGL-204ENST00000467997 1373 ntTSL 521.76■■□□□ 1.072e-7■■■■□ 21.5
CSTF2P33240 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.28■□□□□ 0.362e-7■■■■□ 21.5
CSTF2P33240 PACRGL-215ENST00000506702 1233 ntTSL 516.16■□□□□ 0.182e-7■■■■□ 21.5
CSTF2P33240 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.112e-7■■■■□ 21.5
CSTF2P33240 KLHDC4-222ENST00000568444 388 ntTSL 313.7□□□□□ -0.222e-7■■■■□ 21.5
CSTF2P33240 PACRGL-205ENST00000471979 1394 ntTSL 24.91□□□□□ -1.622e-7■■■■□ 21.5
CSTF2P33240 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.69□□□□□ -0.061e-6■■■■□ 21.4
CSTF2P33240 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.091e-6■■■■□ 21.4
CSTF2P33240 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.492e-6■■■■□ 21.4
CSTF2P33240 PTPRG-203ENST00000474889 9021 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.72e-6■■■■□ 21.4
CSTF2P33240 ZNF581-202ENST00000585995 591 ntTSL 318.7■□□□□ 0.587e-8■■■■□ 21.4
CSTF2P33240 CCDC106-208ENST00000592996 741 ntTSL 318.27■□□□□ 0.527e-8■■■■□ 21.4
CSTF2P33240 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.532e-6■■■■□ 21.4
CSTF2P33240 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.5□□□□□ -1.853e-6■■■■□ 21.4
CSTF2P33240 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.13e-6■■■■□ 21.4
CSTF2P33240 NEDD9-201ENST00000379433 3341 ntTSL 1 (best) BASIC10.27□□□□□ -0.762e-7■■■■□ 21.4
CSTF2P33240 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.242e-7■■■■□ 21.4
CSTF2P33240 TAF4-203ENST00000474089 532 ntTSL 219.27■□□□□ 0.687e-7■■■■□ 21.4
CSTF2P33240 PRH1-203ENST00000538332 675 ntAPPRIS ALT2 TSL 53.91□□□□□ -1.788e-9■■■■□ 21.4
CSTF2P33240 SETD5-214ENST00000463180 685 ntTSL 219.41■□□□□ 0.71e-7■■■■□ 21.3
CSTF2P33240 PIK3CB-204ENST00000462898 4747 ntTSL 516.59■□□□□ 0.251e-7■■■■□ 21.3
CSTF2P33240 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.63□□□□□ -0.231e-7■■■■□ 21.3
CSTF2P33240 AC011462.4-201ENST00000616866 449 ntBASIC12.83□□□□□ -0.361e-7■■■■□ 21.3
CSTF2P33240 PDE4D-206ENST00000405053 512 ntTSL 510.33□□□□□ -0.761e-7■■■■□ 21.3
CSTF2P33240 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.921e-7■■■■□ 21.3
CSTF2P33240 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.941e-7■■■■□ 21.3
CSTF2P33240 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.321e-7■■■■□ 21.3
CSTF2P33240 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.331e-7■■■■□ 21.3
CSTF2P33240 FAR2P1-204ENST00000444030 764 ntTSL 1 (best)5.09□□□□□ -1.591e-7■■■■□ 21.3
CSTF2P33240 PIK3CB-203ENST00000462294 542 ntTSL 54.52□□□□□ -1.691e-7■■■■□ 21.3
CSTF2P33240 USP9Y-202ENST00000426564 9118 ntTSL 24.32□□□□□ -1.721e-7■■■■□ 21.3
CSTF2P33240 PDE4D-221ENST00000514231 733 ntTSL 34.31□□□□□ -1.721e-7■■■■□ 21.3
CSTF2P33240 PDE4D-220ENST00000512069 536 ntTSL 23.89□□□□□ -1.791e-7■■■■□ 21.3
CSTF2P33240 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.56□□□□□ -1.841e-7■■■■□ 21.3
CSTF2P33240 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.851e-7■■■■□ 21.3
CSTF2P33240 ZNF263-206ENST00000574674 691 ntTSL 26.07□□□□□ -1.442e-7■■■■□ 21.3
CSTF2P33240 ZNF263-207ENST00000575332 2637 ntTSL 34.55□□□□□ -1.682e-7■■■■□ 21.3
CSTF2P33240 SOX5-214ENST00000542241 376 ntTSL 33.67□□□□□ -1.822e-6■■■■□ 21.3
CSTF2P33240 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.239e-7■■■■□ 21.3
CSTF2P33240 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.28□□□□□ -0.449e-7■■■■□ 21.3
CSTF2P33240 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.459e-7■■■■□ 21.3
CSTF2P33240 WNK1-204ENST00000530271 11804 ntTSL 1 (best) BASIC10.93□□□□□ -0.669e-7■■■■□ 21.3
CSTF2P33240 RPL38-201ENST00000311111 1170 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.827e-7■■■■□ 21.3
CSTF2P33240 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.412e-7■■■■□ 21.3
CSTF2P33240 PPM1G-203ENST00000484925 836 ntTSL 217.05■□□□□ 0.322e-7■■■■□ 21.3
CSTF2P33240 PPM1G-202ENST00000472077 3752 ntTSL 28.72□□□□□ -1.012e-7■■■■□ 21.3
CSTF2P33240 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.79■□□□□ 0.62e-6■■■■□ 21.3
CSTF2P33240 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.546e-7■■■■□ 21.3
CSTF2P33240 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.396e-7■■■■□ 21.3
CSTF2P33240 TRAPPC12-209ENST00000441099 698 ntTSL 315.54■□□□□ 0.086e-7■■■■□ 21.3
CSTF2P33240 TRAPPC12-210ENST00000441983 683 ntTSL 314.61□□□□□ -0.076e-7■■■■□ 21.3
CSTF2P33240 TRAPPC12-207ENST00000433382 578 ntTSL 512.01□□□□□ -0.496e-7■■■■□ 21.3
CSTF2P33240 TRAPPC12-218ENST00000479897 454 ntTSL 311.98□□□□□ -0.496e-7■■■■□ 21.3
CSTF2P33240 TRAPPC12-206ENST00000417243 1047 ntTSL 511.98□□□□□ -0.496e-7■■■■□ 21.3
CSTF2P33240 TRAPPC12-219ENST00000479955 420 ntTSL 311.29□□□□□ -0.66e-7■■■■□ 21.3
CSTF2P33240 TRAPPC12-215ENST00000469147 1002 ntTSL 39.3□□□□□ -0.926e-7■■■■□ 21.3
CSTF2P33240 TRAPPC12-214ENST00000462983 543 ntTSL 48.89□□□□□ -0.996e-7■■■■□ 21.3
CSTF2P33240 MALRD1-202ENST00000377266 4461 ntTSL 510.15□□□□□ -0.783e-6■■■■□ 21.3
CSTF2P33240 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.663e-6■■■■□ 21.3
CSTF2P33240 ZNF790-204ENST00000528994 922 ntTSL 315.89■□□□□ 0.135e-7■■■■□ 21.3
CSTF2P33240 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.115e-7■■■■□ 21.3
CSTF2P33240 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.145e-7■■■■□ 21.3
CSTF2P33240 ZNF790-203ENST00000527645 578 ntTSL 410.29□□□□□ -0.765e-7■■■■□ 21.3
CSTF2P33240 ZNF790-202ENST00000525288 538 ntTSL 38.71□□□□□ -1.025e-7■■■■□ 21.3
CSTF2P33240 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.035e-7■■■■□ 21.3
CSTF2P33240 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.355e-7■■■■□ 21.3
CSTF2P33240 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.555e-7■■■■□ 21.3
CSTF2P33240 ZNF790-205ENST00000586323 581 ntTSL 43.92□□□□□ -1.785e-7■■■■□ 21.3
CSTF2P33240 CLIC4-204ENST00000497755 672 ntTSL 321.7■■□□□ 1.063e-6■■■■□ 21.3
CSTF2P33240 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.353e-6■■■■□ 21.3
CSTF2P33240 CLIC4-202ENST00000488683 2723 ntTSL 211.92□□□□□ -0.53e-6■■■■□ 21.3
CSTF2P33240 SPRED2-202ENST00000421087 701 ntTSL 318.82■□□□□ 0.61e-6■■■■□ 21.2
CSTF2P33240 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.373e-6■■■■□ 21.2
CSTF2P33240 SPRED2-207ENST00000452315 1365 ntTSL 1 (best)16.36■□□□□ 0.211e-6■■■■□ 21.2
CSTF2P33240 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.181e-6■■■■□ 21.2
CSTF2P33240 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.481e-6■■■■□ 21.2
CSTF2P33240 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.412e-6■■■■□ 21.2
CSTF2P33240 ZCCHC2-202ENST00000585873 5652 ntTSL 1 (best)18.95■□□□□ 0.623e-7■■■■□ 21.1
CSTF2P33240 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.373e-7■■■■□ 21.1
CSTF2P33240 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.393e-7■■■■□ 21.1
CSTF2P33240 SOGA1-202ENST00000279034 3703 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.733e-7■■■■□ 21.1
CSTF2P33240 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.961e-7■■■■□ 21.1
CSTF2P33240 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.131e-7■■■■□ 21.1
CSTF2P33240 CAMK2N1-202ENST00000489020 812 ntTSL 313.91□□□□□ -0.181e-7■■■■□ 21.1
CSTF2P33240 FAM177A1-206ENST00000553955 731 ntTSL 313.3□□□□□ -0.281e-7■■■■□ 21.1
CSTF2P33240 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC12.97□□□□□ -0.331e-7■■■■□ 21.1
Retrieved 100 of 6,735 protein–RNA pairs in 398.6 ms