RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 NISCHQ9Y2I1 1504 aa27.62■■■□□ 2.01
TRAPPC12-219ENST00000479955 CCDC180Q9P1Z9 1646 aa24.4■■□□□ 1.5
TRAPPC12-219ENST00000479955 ABCC9O60706 1549 aa23.43■■□□□ 1.34
TRAPPC12-219ENST00000479955 ZCCHC6Q5VYS8 1495 aaKnown RBP23.07■■□□□ 1.28
TRAPPC12-219ENST00000479955 DCAF8L2P0C7V8 631 aa22.97■■□□□ 1.27
TRAPPC12-219ENST00000479955 DCAF1Q9Y4B6 1507 aa22.91■■□□□ 1.26
TRAPPC12-219ENST00000479955 MYO15BQ96JP2 1530 aa22.87■■□□□ 1.25
TRAPPC12-219ENST00000479955 NACADO15069 1562 aa22.87■■□□□ 1.25
TRAPPC12-219ENST00000479955 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
TRAPPC12-219ENST00000479955 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
TRAPPC12-219ENST00000479955 UNC13AQ9UPW8 1703 aa22.2■■□□□ 1.14
TRAPPC12-219ENST00000479955 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
TRAPPC12-219ENST00000479955 BICRAQ9NZM4 1560 aa21.99■■□□□ 1.11
TRAPPC12-219ENST00000479955 PABPN1Q86U42 306 aaKnown RBP eCLIP21.98■■□□□ 1.11
TRAPPC12-219ENST00000479955 EIF4G1Q04637 1599 aaKnown RBP21.42■■□□□ 1.02
TRAPPC12-219ENST00000479955 CECR2Q9BXF3 1484 aa21.42■■□□□ 1.02
TRAPPC12-219ENST00000479955 BAZ1AQ9NRL2 1556 aaPredicted RBP21.41■■□□□ 1.02
TRAPPC12-219ENST00000479955 SMARCA4P51532 1647 aa21.33■■□□□ 1.01
TRAPPC12-219ENST00000479955 MROH2BQ7Z745 1585 aa21.26■□□□□ 0.99
TRAPPC12-219ENST00000479955 CC2D2AQ9P2K1 1620 aa21.22■□□□□ 0.99
TRAPPC12-219ENST00000479955 RSF1Q96T23 1441 aaPredicted RBP21.19■□□□□ 0.98
TRAPPC12-219ENST00000479955 SMARCA2P51531 1590 aa21.16■□□□□ 0.98
TRAPPC12-219ENST00000479955 PEG3Q9GZU2 1588 aa21.14■□□□□ 0.97
TRAPPC12-219ENST00000479955 ATAD2BQ9ULI0 1458 aa21.13■□□□□ 0.97
TRAPPC12-219ENST00000479955 DNAJC5BQ9UF47 199 aa21.1■□□□□ 0.97
TRAPPC12-219ENST00000479955 NCAPD3P42695 1498 aa21.08■□□□□ 0.97
TRAPPC12-219ENST00000479955 WIZO95785 1651 aa21.05■□□□□ 0.96
TRAPPC12-219ENST00000479955 BAZ1BQ9UIG0 1483 aaKnown RBP21■□□□□ 0.95
TRAPPC12-219ENST00000479955 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
TRAPPC12-219ENST00000479955 SUPT5HO00267 1087 aaKnown RBP20.99■□□□□ 0.95
TRAPPC12-219ENST00000479955 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
TRAPPC12-219ENST00000479955 CCDC88BA6NC98 1476 aa20.63■□□□□ 0.89
TRAPPC12-219ENST00000479955 CADPSQ9ULU8 1353 aa20.49■□□□□ 0.87
TRAPPC12-219ENST00000479955 LAMC3Q9Y6N6 1575 aa20.46■□□□□ 0.87
TRAPPC12-219ENST00000479955 CFTRP13569 1480 aa20.43■□□□□ 0.86
TRAPPC12-219ENST00000479955 NESP48681 1621 aa20.37■□□□□ 0.85
TRAPPC12-219ENST00000479955 PDS5BQ9NTI5 1447 aa20.35■□□□□ 0.85
TRAPPC12-219ENST00000479955 PRDM2Q13029 1718 aa20.32■□□□□ 0.84
TRAPPC12-219ENST00000479955 FANCD2Q9BXW9 1451 aa20.24■□□□□ 0.83
TRAPPC12-219ENST00000479955 ERCC6Q03468 1493 aa20.22■□□□□ 0.83
TRAPPC12-219ENST00000479955 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
TRAPPC12-219ENST00000479955 KIF21AQ7Z4S6 1674 aa20.16■□□□□ 0.82
TRAPPC12-219ENST00000479955 ABCC8Q09428 1581 aa20.07■□□□□ 0.8
TRAPPC12-219ENST00000479955 MRC2Q9UBG0 1479 aa20.06■□□□□ 0.8
TRAPPC12-219ENST00000479955 WRNQ14191 1432 aaPredicted RBP eCLIP20■□□□□ 0.79
TRAPPC12-219ENST00000479955 THOC2Q8NI27 1593 aaKnown RBP19.98■□□□□ 0.79
TRAPPC12-219ENST00000479955 DNMBPQ6XZF7 1577 aa19.97■□□□□ 0.79
TRAPPC12-219ENST00000479955 WDR62O43379 1518 aa19.97■□□□□ 0.79
TRAPPC12-219ENST00000479955 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
TRAPPC12-219ENST00000479955 TOPBP1Q92547 1522 aa19.94■□□□□ 0.78
TRAPPC12-219ENST00000479955 CUX1P39880 1505 aa19.92■□□□□ 0.78
TRAPPC12-219ENST00000479955 TOP2BQ02880 1626 aa19.9■□□□□ 0.78
TRAPPC12-219ENST00000479955 BIVM-ERCC5R4GMW8 1640 aa19.88■□□□□ 0.77
TRAPPC12-219ENST00000479955 TRIM41Q8WV44 630 aa19.87■□□□□ 0.77
TRAPPC12-219ENST00000479955 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
TRAPPC12-219ENST00000479955 CUX2O14529 1486 aa19.86■□□□□ 0.77
TRAPPC12-219ENST00000479955 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
TRAPPC12-219ENST00000479955 FGD5Q6ZNL6 1462 aa19.81■□□□□ 0.76
TRAPPC12-219ENST00000479955 POLA1P09884 1462 aaPredicted RBP19.79■□□□□ 0.76
TRAPPC12-219ENST00000479955 SOGA1O94964 1423 aa19.76■□□□□ 0.75
TRAPPC12-219ENST00000479955 IFT140Q96RY7 1462 aa19.75■□□□□ 0.75
TRAPPC12-219ENST00000479955 RAD54L2Q9Y4B4 1467 aa19.68■□□□□ 0.74
TRAPPC12-219ENST00000479955 TARBP1Q13395 1621 aaKnown RBP19.68■□□□□ 0.74
TRAPPC12-219ENST00000479955 ABCA10Q8WWZ4 1543 aa19.66■□□□□ 0.74
TRAPPC12-219ENST00000479955 WDR97A6NE52 1622 aa19.63■□□□□ 0.73
TRAPPC12-219ENST00000479955 KIF27Q86VH2 1401 aa19.59■□□□□ 0.73
TRAPPC12-219ENST00000479955 TDRD9Q8NDG6 1382 aaKnown RBP19.57■□□□□ 0.72
TRAPPC12-219ENST00000479955 ZNF608Q9ULD9 1512 aaPredicted RBP19.56■□□□□ 0.72
TRAPPC12-219ENST00000479955 GAPVD1Q14C86 1478 aa19.54■□□□□ 0.72
TRAPPC12-219ENST00000479955 AQRO60306 1485 aaKnown RBP eCLIP19.53■□□□□ 0.72
TRAPPC12-219ENST00000479955 EIF4G3O43432 1585 aaKnown RBP19.52■□□□□ 0.71
TRAPPC12-219ENST00000479955 EEA1Q15075 1411 aa19.51■□□□□ 0.71
TRAPPC12-219ENST00000479955 ABCA5Q8WWZ7 1642 aa19.51■□□□□ 0.71
TRAPPC12-219ENST00000479955 GRIN2BQ13224 1484 aa19.48■□□□□ 0.71
TRAPPC12-219ENST00000479955 ERICH3Q5RHP9 1530 aa19.46■□□□□ 0.71
TRAPPC12-219ENST00000479955 PBRM1Q86U86 1689 aa19.43■□□□□ 0.7
TRAPPC12-219ENST00000479955 RUSC2Q8N2Y8 1516 aa19.42■□□□□ 0.7
TRAPPC12-219ENST00000479955 CSRNP3Q8WYN3 585 aa19.41■□□□□ 0.7
TRAPPC12-219ENST00000479955 IGF1RP08069 1367 aa19.41■□□□□ 0.7
TRAPPC12-219ENST00000479955 MAGI1Q96QZ7 1491 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC12-219ENST00000479955 FAM9AQ8IZU1 332 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC12-219ENST00000479955 CUL7Q14999 1698 aa19.36■□□□□ 0.69
TRAPPC12-219ENST00000479955 SNAPC4Q5SXM2 1469 aa19.35■□□□□ 0.69
TRAPPC12-219ENST00000479955 FHAD1B1AJZ9 1412 aa19.34■□□□□ 0.69
TRAPPC12-219ENST00000479955 CARMIL1Q5VZK9 1371 aa19.33■□□□□ 0.69
TRAPPC12-219ENST00000479955 CHMP7Q8WUX9 453 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC12-219ENST00000479955 SYNJ2O15056 1496 aa19.3■□□□□ 0.68
TRAPPC12-219ENST00000479955 ADAMTS12P58397 1594 aa19.3■□□□□ 0.68
TRAPPC12-219ENST00000479955 FBLN2P98095 1184 aa19.28■□□□□ 0.68
TRAPPC12-219ENST00000479955 PRXQ9BXM0 1461 aa19.26■□□□□ 0.67
TRAPPC12-219ENST00000479955 RAPGEF2Q9Y4G8 1499 aa19.26■□□□□ 0.67
TRAPPC12-219ENST00000479955 GRIN2AQ12879 1464 aa19.22■□□□□ 0.67
TRAPPC12-219ENST00000479955 KIF21BO75037 1637 aa19.21■□□□□ 0.67
TRAPPC12-219ENST00000479955 CHD1O14646 1710 aa19.2■□□□□ 0.66
TRAPPC12-219ENST00000479955 OSCARQ8IYS5 282 aa19.17■□□□□ 0.66
TRAPPC12-219ENST00000479955 GOLGA3Q08378 1498 aa19.15■□□□□ 0.66
TRAPPC12-219ENST00000479955 NUP160Q12769 1436 aa19.1■□□□□ 0.65
TRAPPC12-219ENST00000479955 UBTFP17480 764 aaKnown RBP19.1■□□□□ 0.65
TRAPPC12-219ENST00000479955 CEP170Q5SW79 1584 aa19.06■□□□□ 0.64
TRAPPC12-219ENST00000479955 KIAA0586Q9BVV6 1533 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms