RNA–Protein interactions for RNA: ENST00000405053.7

PDE4D-206, Transcript of phosphodiesterase 4D, humanhuman

TSL 5

Gene PDE4D, Length 512 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-206ENST00000405053 NISCHQ9Y2I1 1504 aa25.6■■□□□ 1.69
PDE4D-206ENST00000405053 CCDC180Q9P1Z9 1646 aa22.57■■□□□ 1.2
PDE4D-206ENST00000405053 ABCC9O60706 1549 aa21.65■■□□□ 1.06
PDE4D-206ENST00000405053 ZCCHC6Q5VYS8 1495 aaKnown RBP21.42■■□□□ 1.02
PDE4D-206ENST00000405053 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
PDE4D-206ENST00000405053 MYO15BQ96JP2 1530 aa21.19■□□□□ 0.98
PDE4D-206ENST00000405053 NACADO15069 1562 aa21.13■□□□□ 0.97
PDE4D-206ENST00000405053 DCAF8L2P0C7V8 631 aa21.12■□□□□ 0.97
PDE4D-206ENST00000405053 RB1CC1Q8TDY2 1594 aa21.03■□□□□ 0.96
PDE4D-206ENST00000405053 SCRIBQ14160 1630 aa20.58■□□□□ 0.89
PDE4D-206ENST00000405053 UNC13AQ9UPW8 1703 aa20.54■□□□□ 0.88
PDE4D-206ENST00000405053 BICRAQ9NZM4 1560 aa20.41■□□□□ 0.86
PDE4D-206ENST00000405053 SHROOM4Q9ULL8 1493 aa20.38■□□□□ 0.85
PDE4D-206ENST00000405053 PABPN1Q86U42 306 aaKnown RBP eCLIP20.29■□□□□ 0.84
PDE4D-206ENST00000405053 CECR2Q9BXF3 1484 aa19.87■□□□□ 0.77
PDE4D-206ENST00000405053 EIF4G1Q04637 1599 aaKnown RBP19.82■□□□□ 0.76
PDE4D-206ENST00000405053 BAZ1AQ9NRL2 1556 aaPredicted RBP19.81■□□□□ 0.76
PDE4D-206ENST00000405053 SMARCA4P51532 1647 aa19.76■□□□□ 0.75
PDE4D-206ENST00000405053 MROH2BQ7Z745 1585 aa19.72■□□□□ 0.75
PDE4D-206ENST00000405053 RSF1Q96T23 1441 aaPredicted RBP19.67■□□□□ 0.74
PDE4D-206ENST00000405053 CC2D2AQ9P2K1 1620 aa19.62■□□□□ 0.73
PDE4D-206ENST00000405053 PEG3Q9GZU2 1588 aa19.61■□□□□ 0.73
PDE4D-206ENST00000405053 ATAD2BQ9ULI0 1458 aa19.57■□□□□ 0.72
PDE4D-206ENST00000405053 SMARCA2P51531 1590 aa19.56■□□□□ 0.72
PDE4D-206ENST00000405053 DNAJC5BQ9UF47 199 aa19.53■□□□□ 0.72
PDE4D-206ENST00000405053 NCAPD3P42695 1498 aa19.52■□□□□ 0.72
PDE4D-206ENST00000405053 WIZO95785 1651 aa19.5■□□□□ 0.71
PDE4D-206ENST00000405053 HMGXB3Q12766 1538 aa19.45■□□□□ 0.7
PDE4D-206ENST00000405053 BAZ1BQ9UIG0 1483 aaKnown RBP19.41■□□□□ 0.7
PDE4D-206ENST00000405053 SUPT5HO00267 1087 aaKnown RBP19.39■□□□□ 0.69
PDE4D-206ENST00000405053 TOP2AP11388 1531 aaKnown RBP19.35■□□□□ 0.69
PDE4D-206ENST00000405053 CCDC88BA6NC98 1476 aa19.12■□□□□ 0.65
PDE4D-206ENST00000405053 CADPSQ9ULU8 1353 aa18.95■□□□□ 0.62
PDE4D-206ENST00000405053 CFTRP13569 1480 aa18.94■□□□□ 0.62
PDE4D-206ENST00000405053 LAMC3Q9Y6N6 1575 aa18.91■□□□□ 0.62
PDE4D-206ENST00000405053 NESP48681 1621 aa18.86■□□□□ 0.61
PDE4D-206ENST00000405053 PRDM2Q13029 1718 aa18.77■□□□□ 0.6
PDE4D-206ENST00000405053 PDS5BQ9NTI5 1447 aa18.76■□□□□ 0.59
PDE4D-206ENST00000405053 FANCD2Q9BXW9 1451 aa18.71■□□□□ 0.59
PDE4D-206ENST00000405053 CEP164Q9UPV0 1460 aa18.65■□□□□ 0.58
PDE4D-206ENST00000405053 KIF21AQ7Z4S6 1674 aa18.64■□□□□ 0.57
PDE4D-206ENST00000405053 ERCC6Q03468 1493 aa18.62■□□□□ 0.57
PDE4D-206ENST00000405053 MRC2Q9UBG0 1479 aa18.54■□□□□ 0.56
PDE4D-206ENST00000405053 ABCC8Q09428 1581 aa18.51■□□□□ 0.55
PDE4D-206ENST00000405053 THOC2Q8NI27 1593 aaKnown RBP18.51■□□□□ 0.55
PDE4D-206ENST00000405053 WRNQ14191 1432 aaPredicted RBP eCLIP18.51■□□□□ 0.55
PDE4D-206ENST00000405053 URB2Q14146 1524 aaKnown RBP18.5■□□□□ 0.55
PDE4D-206ENST00000405053 DNMBPQ6XZF7 1577 aa18.48■□□□□ 0.55
PDE4D-206ENST00000405053 WDR62O43379 1518 aa18.48■□□□□ 0.55
PDE4D-206ENST00000405053 CUX1P39880 1505 aa18.48■□□□□ 0.55
PDE4D-206ENST00000405053 TOPBP1Q92547 1522 aa18.46■□□□□ 0.55
PDE4D-206ENST00000405053 SYNJ1O43426 1573 aa18.43■□□□□ 0.54
PDE4D-206ENST00000405053 TOP2BQ02880 1626 aa18.43■□□□□ 0.54
PDE4D-206ENST00000405053 BIVM-ERCC5R4GMW8 1640 aa18.42■□□□□ 0.54
PDE4D-206ENST00000405053 CHIC1Q5VXU3 224 aa18.39■□□□□ 0.53
PDE4D-206ENST00000405053 CUX2O14529 1486 aa18.33■□□□□ 0.53
PDE4D-206ENST00000405053 POLA1P09884 1462 aaPredicted RBP18.33■□□□□ 0.53
PDE4D-206ENST00000405053 FGD5Q6ZNL6 1462 aa18.33■□□□□ 0.53
PDE4D-206ENST00000405053 TRIM41Q8WV44 630 aa18.32■□□□□ 0.52
PDE4D-206ENST00000405053 IFT140Q96RY7 1462 aa18.26■□□□□ 0.51
PDE4D-206ENST00000405053 SOGA1O94964 1423 aa18.25■□□□□ 0.51
PDE4D-206ENST00000405053 TARBP1Q13395 1621 aaKnown RBP18.24■□□□□ 0.51
PDE4D-206ENST00000405053 RAD54L2Q9Y4B4 1467 aa18.23■□□□□ 0.51
PDE4D-206ENST00000405053 ABCA10Q8WWZ4 1543 aa18.21■□□□□ 0.51
PDE4D-206ENST00000405053 WDR97A6NE52 1622 aa18.17■□□□□ 0.5
PDE4D-206ENST00000405053 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
PDE4D-206ENST00000405053 KIF27Q86VH2 1401 aa18.09■□□□□ 0.49
PDE4D-206ENST00000405053 TDRD9Q8NDG6 1382 aaKnown RBP18.09■□□□□ 0.49
PDE4D-206ENST00000405053 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
PDE4D-206ENST00000405053 AQRO60306 1485 aaKnown RBP eCLIP18.07■□□□□ 0.48
PDE4D-206ENST00000405053 EIF4G3O43432 1585 aaKnown RBP18.06■□□□□ 0.48
PDE4D-206ENST00000405053 GAPVD1Q14C86 1478 aa18.06■□□□□ 0.48
PDE4D-206ENST00000405053 EEA1Q15075 1411 aa18.04■□□□□ 0.48
PDE4D-206ENST00000405053 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
PDE4D-206ENST00000405053 GRIN2BQ13224 1484 aa18.01■□□□□ 0.47
PDE4D-206ENST00000405053 ERICH3Q5RHP9 1530 aa18■□□□□ 0.47
PDE4D-206ENST00000405053 IGF1RP08069 1367 aa17.99■□□□□ 0.47
PDE4D-206ENST00000405053 PBRM1Q86U86 1689 aa17.96■□□□□ 0.47
PDE4D-206ENST00000405053 CSRNP3Q8WYN3 585 aa17.93■□□□□ 0.46
PDE4D-206ENST00000405053 MAGI1Q96QZ7 1491 aaPredicted RBP17.93■□□□□ 0.46
PDE4D-206ENST00000405053 SNAPC4Q5SXM2 1469 aa17.91■□□□□ 0.46
PDE4D-206ENST00000405053 CUL7Q14999 1698 aa17.89■□□□□ 0.45
PDE4D-206ENST00000405053 ADAMTS12P58397 1594 aa17.88■□□□□ 0.45
PDE4D-206ENST00000405053 FAM9AQ8IZU1 332 aaPredicted RBP17.88■□□□□ 0.45
PDE4D-206ENST00000405053 FHAD1B1AJZ9 1412 aa17.88■□□□□ 0.45
PDE4D-206ENST00000405053 PRXQ9BXM0 1461 aa17.88■□□□□ 0.45
PDE4D-206ENST00000405053 CARMIL1Q5VZK9 1371 aa17.87■□□□□ 0.45
PDE4D-206ENST00000405053 SYNJ2O15056 1496 aa17.85■□□□□ 0.45
PDE4D-206ENST00000405053 RAPGEF2Q9Y4G8 1499 aa17.81■□□□□ 0.44
PDE4D-206ENST00000405053 KIF21BO75037 1637 aa17.8■□□□□ 0.44
PDE4D-206ENST00000405053 GRIN2AQ12879 1464 aa17.77■□□□□ 0.44
PDE4D-206ENST00000405053 CHMP7Q8WUX9 453 aaPredicted RBP17.77■□□□□ 0.44
PDE4D-206ENST00000405053 CHD1O14646 1710 aa17.73■□□□□ 0.43
PDE4D-206ENST00000405053 GOLGA3Q08378 1498 aa17.72■□□□□ 0.43
PDE4D-206ENST00000405053 FBLN2P98095 1184 aa17.72■□□□□ 0.43
PDE4D-206ENST00000405053 NUP160Q12769 1436 aa17.71■□□□□ 0.43
PDE4D-206ENST00000405053 CEP170Q5SW79 1584 aa17.66■□□□□ 0.42
PDE4D-206ENST00000405053 KIAA0586Q9BVV6 1533 aa17.62■□□□□ 0.41
PDE4D-206ENST00000405053 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
PDE4D-206ENST00000405053 CLASP1Q7Z460 1538 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms