RNA–Protein interactions for RNA: ENST00000617797.1

CUL1-204, Transcript of cullin 1, humanhuman

TSL 1 (best) BASIC

Gene CUL1, Length 2,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-204ENST00000617797 CHIC1Q5VXU3 224 aa14.74□□□□□ -0.05
CUL1-204ENST00000617797 AEBP2Q6ZN18 517 aaPredicted RBP14.42□□□□□ -0.1
CUL1-204ENST00000617797 NISCHQ9Y2I1 1504 aa14.1□□□□□ -0.15
CUL1-204ENST00000617797 PHF23Q9BUL5 403 aaPredicted RBP13.08□□□□□ -0.32
CUL1-204ENST00000617797 PLPPR3Q6T4P5 718 aa12.29□□□□□ -0.44
CUL1-204ENST00000617797 CCDC180Q9P1Z9 1646 aa12.19□□□□□ -0.46
CUL1-204ENST00000617797 SENP3Q9H4L4 574 aaPredicted RBP12.07□□□□□ -0.48
CUL1-204ENST00000617797 ZCCHC6Q5VYS8 1495 aaKnown RBP11.89□□□□□ -0.51
CUL1-204ENST00000617797 SHROOM4Q9ULL8 1493 aa11.73□□□□□ -0.53
CUL1-204ENST00000617797 DCAF1Q9Y4B6 1507 aa11.63□□□□□ -0.55
CUL1-204ENST00000617797 EHMT2Q96KQ7 1210 aa11.61□□□□□ -0.55
CUL1-204ENST00000617797 DCAF8L2P0C7V8 631 aa11.58□□□□□ -0.56
CUL1-204ENST00000617797 ADRA2BP18089 450 aa11.53□□□□□ -0.56
CUL1-204ENST00000617797 KCNA4P22459 653 aa11.51□□□□□ -0.57
CUL1-204ENST00000617797 SUPT5HO00267 1087 aaKnown RBP11.39□□□□□ -0.59
CUL1-204ENST00000617797 MYO15BQ96JP2 1530 aa11.37□□□□□ -0.59
CUL1-204ENST00000617797 PPP6R1Q9UPN7 881 aa11.33□□□□□ -0.6
CUL1-204ENST00000617797 ABCC9O60706 1549 aa11.32□□□□□ -0.6
CUL1-204ENST00000617797 SCRIBQ14160 1630 aa11.28□□□□□ -0.6
CUL1-204ENST00000617797 NACADO15069 1562 aa11.27□□□□□ -0.61
CUL1-204ENST00000617797 FOXD1Q16676 465 aa11.15□□□□□ -0.62
CUL1-204ENST00000617797 CSRNP3Q8WYN3 585 aa11.13□□□□□ -0.63
CUL1-204ENST00000617797 RB1CC1Q8TDY2 1594 aa11.13□□□□□ -0.63
CUL1-204ENST00000617797 SLC4A1APQ9BWU0 796 aaKnown RBP11.06□□□□□ -0.64
CUL1-204ENST00000617797 RSF1Q96T23 1441 aaPredicted RBP11.03□□□□□ -0.64
CUL1-204ENST00000617797 UNC13AQ9UPW8 1703 aa11.01□□□□□ -0.65
CUL1-204ENST00000617797 CECR2Q9BXF3 1484 aa10.96□□□□□ -0.65
CUL1-204ENST00000617797 MROH2BQ7Z745 1585 aa10.93□□□□□ -0.66
CUL1-204ENST00000617797 PPP4R3CPQ6ZMV5 832 aa10.92□□□□□ -0.66
CUL1-204ENST00000617797 SLC24A1O60721 1099 aa10.89□□□□□ -0.67
CUL1-204ENST00000617797 WIZO95785 1651 aa10.89□□□□□ -0.67
CUL1-204ENST00000617797 BAZ1AQ9NRL2 1556 aaPredicted RBP10.86□□□□□ -0.67
CUL1-204ENST00000617797 NCBP3Q53F19 620 aaKnown RBP10.82□□□□□ -0.68
CUL1-204ENST00000617797 BICRAQ9NZM4 1560 aa10.82□□□□□ -0.68
CUL1-204ENST00000617797 SMARCA4P51532 1647 aa10.81□□□□□ -0.68
CUL1-204ENST00000617797 TOP2AP11388 1531 aaKnown RBP10.73□□□□□ -0.69
CUL1-204ENST00000617797 PABPN1Q86U42 306 aaKnown RBP eCLIP10.72□□□□□ -0.69
CUL1-204ENST00000617797 NPM3O75607 178 aaKnown RBP10.7□□□□□ -0.7
CUL1-204ENST00000617797 PIAS4Q8N2W9 510 aaPredicted RBP10.69□□□□□ -0.7
CUL1-204ENST00000617797 EIF4G1Q04637 1599 aaKnown RBP10.69□□□□□ -0.7
CUL1-204ENST00000617797 TRIM41Q8WV44 630 aa10.66□□□□□ -0.7
CUL1-204ENST00000617797 SMARCA2P51531 1590 aa10.66□□□□□ -0.7
CUL1-204ENST00000617797 LOC105371045A0A1W2PR82 267 aa10.63□□□□□ -0.71
CUL1-204ENST00000617797 PEG3Q9GZU2 1588 aa10.63□□□□□ -0.71
CUL1-204ENST00000617797 CCDC88BA6NC98 1476 aa10.63□□□□□ -0.71
CUL1-204ENST00000617797 ZBTB22O15209 634 aa10.61□□□□□ -0.71
CUL1-204ENST00000617797 ATAD2BQ9ULI0 1458 aa10.54□□□□□ -0.72
CUL1-204ENST00000617797 ABCC8Q09428 1581 aa10.53□□□□□ -0.72
CUL1-204ENST00000617797 RTN4Q9NQC3 1192 aaKnown RBP10.52□□□□□ -0.72
CUL1-204ENST00000617797 FAM9AQ8IZU1 332 aaPredicted RBP10.52□□□□□ -0.73
CUL1-204ENST00000617797 BAZ1BQ9UIG0 1483 aaKnown RBP10.5□□□□□ -0.73
CUL1-204ENST00000617797 CNKSR2Q8WXI2 1034 aa10.45□□□□□ -0.74
CUL1-204ENST00000617797 PCGF6Q9BYE7 350 aa10.41□□□□□ -0.74
CUL1-204ENST00000617797 HMGXB3Q12766 1538 aa10.41□□□□□ -0.74
CUL1-204ENST00000617797 NCAPD3P42695 1498 aa10.38□□□□□ -0.75
CUL1-204ENST00000617797 WRNQ14191 1432 aaPredicted RBP eCLIP10.38□□□□□ -0.75
CUL1-204ENST00000617797 SYNJ1O43426 1573 aa10.37□□□□□ -0.75
CUL1-204ENST00000617797 SOGA1O94964 1423 aa10.35□□□□□ -0.75
CUL1-204ENST00000617797 AMER1Q5JTC6 1135 aaPredicted RBP10.35□□□□□ -0.75
CUL1-204ENST00000617797 FOXD4L1Q9NU39 408 aa10.35□□□□□ -0.75
CUL1-204ENST00000617797 EEA1Q15075 1411 aa10.33□□□□□ -0.76
CUL1-204ENST00000617797 RUSC2Q8N2Y8 1516 aa10.32□□□□□ -0.76
CUL1-204ENST00000617797 SCAF1Q9H7N4 1312 aaKnown RBP10.32□□□□□ -0.76
CUL1-204ENST00000617797 TRIM26Q12899 539 aaPredicted RBP10.32□□□□□ -0.76
CUL1-204ENST00000617797 HRCP23327 699 aa10.31□□□□□ -0.76
CUL1-204ENST00000617797 PRDM2Q13029 1718 aa10.29□□□□□ -0.76
CUL1-204ENST00000617797 BIVM-ERCC5R4GMW8 1640 aa10.29□□□□□ -0.76
CUL1-204ENST00000617797 TOP2BQ02880 1626 aa10.28□□□□□ -0.76
CUL1-204ENST00000617797 CC2D2AQ9P2K1 1620 aa10.25□□□□□ -0.77
CUL1-204ENST00000617797 GOLGA3Q08378 1498 aa10.24□□□□□ -0.77
CUL1-204ENST00000617797 TNIKQ9UKE5 1360 aa10.24□□□□□ -0.77
CUL1-204ENST00000617797 KIF21BO75037 1637 aa10.23□□□□□ -0.77
CUL1-204ENST00000617797 CFTRP13569 1480 aa10.23□□□□□ -0.77
CUL1-204ENST00000617797 DNAJC5BQ9UF47 199 aa10.23□□□□□ -0.77
CUL1-204ENST00000617797 CEP162Q5TB80 1403 aa10.22□□□□□ -0.77
CUL1-204ENST00000617797 CEP164Q9UPV0 1460 aa10.2□□□□□ -0.78
CUL1-204ENST00000617797 CUX1P39880 1505 aa10.2□□□□□ -0.78
CUL1-204ENST00000617797 UBTFP17480 764 aaKnown RBP10.17□□□□□ -0.78
CUL1-204ENST00000617797 PPARGC1BQ86YN6 1023 aaKnown RBP10.14□□□□□ -0.79
CUL1-204ENST00000617797 CADPSQ9ULU8 1353 aa10.14□□□□□ -0.79
CUL1-204ENST00000617797 RAPGEF2Q9Y4G8 1499 aa10.13□□□□□ -0.79
CUL1-204ENST00000617797 ERICH3Q5RHP9 1530 aa10.1□□□□□ -0.79
CUL1-204ENST00000617797 MAPK8IP2Q13387 824 aaPredicted RBP10.09□□□□□ -0.79
CUL1-204ENST00000617797 PRXQ9BXM0 1461 aa10.08□□□□□ -0.8
CUL1-204ENST00000617797 CLIP1P30622 1438 aa10.08□□□□□ -0.8
CUL1-204ENST00000617797 KIF27Q86VH2 1401 aa10.08□□□□□ -0.8
CUL1-204ENST00000617797 RNF216Q9NWF9 866 aaPredicted RBP10.07□□□□□ -0.8
CUL1-204ENST00000617797 FANCD2Q9BXW9 1451 aa10.05□□□□□ -0.8
CUL1-204ENST00000617797 FGD5Q6ZNL6 1462 aa10.04□□□□□ -0.8
CUL1-204ENST00000617797 NESP48681 1621 aa10.03□□□□□ -0.8
CUL1-204ENST00000617797 VPS8Q8N3P4 1428 aa10.03□□□□□ -0.8
CUL1-204ENST00000617797 CUX2O14529 1486 aa10.02□□□□□ -0.81
CUL1-204ENST00000617797 TTBK1Q5TCY1 1321 aaPredicted RBP10.02□□□□□ -0.81
CUL1-204ENST00000617797 DNMBPQ6XZF7 1577 aa10.02□□□□□ -0.81
CUL1-204ENST00000617797 LAMC3Q9Y6N6 1575 aa10.02□□□□□ -0.81
CUL1-204ENST00000617797 ZEB1P37275 1124 aaPredicted RBP10.01□□□□□ -0.81
CUL1-204ENST00000617797 FKBP8Q14318 412 aa10.01□□□□□ -0.81
CUL1-204ENST00000617797 TOPBP1Q92547 1522 aa9.98□□□□□ -0.81
CUL1-204ENST00000617797 RANGAP1P46060 587 aaPredicted RBP9.97□□□□□ -0.81
CUL1-204ENST00000617797 ARAP1Q96P48 1450 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms