RNA–Protein interactions for RNA: ENST00000462983.5

TRAPPC12-214, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-214ENST00000462983 NISCHQ9Y2I1 1504 aa22.13■■□□□ 1.13
TRAPPC12-214ENST00000462983 CCDC180Q9P1Z9 1646 aa19.71■□□□□ 0.75
TRAPPC12-214ENST00000462983 ABCC9O60706 1549 aa19.28■□□□□ 0.68
TRAPPC12-214ENST00000462983 DCAF8L2P0C7V8 631 aa18.55■□□□□ 0.56
TRAPPC12-214ENST00000462983 RB1CC1Q8TDY2 1594 aa18.52■□□□□ 0.56
TRAPPC12-214ENST00000462983 NACADO15069 1562 aa18.49■□□□□ 0.55
TRAPPC12-214ENST00000462983 ZCCHC6Q5VYS8 1495 aaKnown RBP18.44■□□□□ 0.54
TRAPPC12-214ENST00000462983 MYO15BQ96JP2 1530 aa18.33■□□□□ 0.52
TRAPPC12-214ENST00000462983 DCAF1Q9Y4B6 1507 aa18.27■□□□□ 0.51
TRAPPC12-214ENST00000462983 UNC13AQ9UPW8 1703 aa18.23■□□□□ 0.51
TRAPPC12-214ENST00000462983 SCRIBQ14160 1630 aa18.02■□□□□ 0.48
TRAPPC12-214ENST00000462983 PABPN1Q86U42 306 aaKnown RBP eCLIP18.01■□□□□ 0.47
TRAPPC12-214ENST00000462983 BICRAQ9NZM4 1560 aa17.98■□□□□ 0.47
TRAPPC12-214ENST00000462983 SHROOM4Q9ULL8 1493 aa17.7■□□□□ 0.42
TRAPPC12-214ENST00000462983 DNAJC5BQ9UF47 199 aa17.66■□□□□ 0.42
TRAPPC12-214ENST00000462983 EIF4G1Q04637 1599 aaKnown RBP17.49■□□□□ 0.39
TRAPPC12-214ENST00000462983 CC2D2AQ9P2K1 1620 aa17.45■□□□□ 0.38
TRAPPC12-214ENST00000462983 CECR2Q9BXF3 1484 aa17.29■□□□□ 0.36
TRAPPC12-214ENST00000462983 SMARCA4P51532 1647 aa17.21■□□□□ 0.35
TRAPPC12-214ENST00000462983 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC12-214ENST00000462983 MROH2BQ7Z745 1585 aa17.09■□□□□ 0.33
TRAPPC12-214ENST00000462983 ATAD2BQ9ULI0 1458 aa17.06■□□□□ 0.32
TRAPPC12-214ENST00000462983 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
TRAPPC12-214ENST00000462983 NCAPD3P42695 1498 aa17.03■□□□□ 0.32
TRAPPC12-214ENST00000462983 PEG3Q9GZU2 1588 aa16.99■□□□□ 0.31
TRAPPC12-214ENST00000462983 HMGXB3Q12766 1538 aa16.97■□□□□ 0.31
TRAPPC12-214ENST00000462983 WIZO95785 1651 aa16.95■□□□□ 0.3
TRAPPC12-214ENST00000462983 BAZ1BQ9UIG0 1483 aaKnown RBP16.95■□□□□ 0.3
TRAPPC12-214ENST00000462983 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC12-214ENST00000462983 TOP2AP11388 1531 aaKnown RBP16.71■□□□□ 0.27
TRAPPC12-214ENST00000462983 NESP48681 1621 aa16.7■□□□□ 0.26
TRAPPC12-214ENST00000462983 LAMC3Q9Y6N6 1575 aa16.62■□□□□ 0.25
TRAPPC12-214ENST00000462983 ERCC6Q03468 1493 aa16.61■□□□□ 0.25
TRAPPC12-214ENST00000462983 KIF21AQ7Z4S6 1674 aa16.56■□□□□ 0.24
TRAPPC12-214ENST00000462983 CADPSQ9ULU8 1353 aa16.54■□□□□ 0.24
TRAPPC12-214ENST00000462983 CCDC88BA6NC98 1476 aa16.51■□□□□ 0.23
TRAPPC12-214ENST00000462983 SUPT5HO00267 1087 aaKnown RBP16.51■□□□□ 0.23
TRAPPC12-214ENST00000462983 PDS5BQ9NTI5 1447 aa16.48■□□□□ 0.23
TRAPPC12-214ENST00000462983 PRDM2Q13029 1718 aa16.46■□□□□ 0.23
TRAPPC12-214ENST00000462983 CFTRP13569 1480 aa16.45■□□□□ 0.22
TRAPPC12-214ENST00000462983 THOC2Q8NI27 1593 aaKnown RBP16.43■□□□□ 0.22
TRAPPC12-214ENST00000462983 CUX2O14529 1486 aa16.38■□□□□ 0.21
TRAPPC12-214ENST00000462983 FANCD2Q9BXW9 1451 aa16.38■□□□□ 0.21
TRAPPC12-214ENST00000462983 CEP164Q9UPV0 1460 aa16.36■□□□□ 0.21
TRAPPC12-214ENST00000462983 MRC2Q9UBG0 1479 aa16.33■□□□□ 0.2
TRAPPC12-214ENST00000462983 DNAJC5Q9H3Z4 198 aa16.32■□□□□ 0.2
TRAPPC12-214ENST00000462983 WDR62O43379 1518 aa16.28■□□□□ 0.2
TRAPPC12-214ENST00000462983 URB2Q14146 1524 aaKnown RBP16.23■□□□□ 0.19
TRAPPC12-214ENST00000462983 TOPBP1Q92547 1522 aa16.14■□□□□ 0.17
TRAPPC12-214ENST00000462983 DNMBPQ6XZF7 1577 aa16.12■□□□□ 0.17
TRAPPC12-214ENST00000462983 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
TRAPPC12-214ENST00000462983 CUX1P39880 1505 aa16.03■□□□□ 0.16
TRAPPC12-214ENST00000462983 IFT140Q96RY7 1462 aa16.01■□□□□ 0.15
TRAPPC12-214ENST00000462983 POLA1P09884 1462 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC12-214ENST00000462983 TARBP1Q13395 1621 aaKnown RBP15.97■□□□□ 0.15
TRAPPC12-214ENST00000462983 FGD5Q6ZNL6 1462 aa15.97■□□□□ 0.15
TRAPPC12-214ENST00000462983 ZNF608Q9ULD9 1512 aaPredicted RBP15.96■□□□□ 0.15
TRAPPC12-214ENST00000462983 RAD54L2Q9Y4B4 1467 aa15.95■□□□□ 0.14
TRAPPC12-214ENST00000462983 EIF4G3O43432 1585 aaKnown RBP15.92■□□□□ 0.14
TRAPPC12-214ENST00000462983 SOGA1O94964 1423 aa15.92■□□□□ 0.14
TRAPPC12-214ENST00000462983 BIVM-ERCC5R4GMW8 1640 aa15.91■□□□□ 0.14
TRAPPC12-214ENST00000462983 WRNQ14191 1432 aaPredicted RBP eCLIP15.91■□□□□ 0.14
TRAPPC12-214ENST00000462983 SYNJ1O43426 1573 aa15.91■□□□□ 0.14
TRAPPC12-214ENST00000462983 TOP2BQ02880 1626 aa15.9■□□□□ 0.14
TRAPPC12-214ENST00000462983 WDR97A6NE52 1622 aa15.87■□□□□ 0.13
TRAPPC12-214ENST00000462983 AQRO60306 1485 aaKnown RBP eCLIP15.87■□□□□ 0.13
TRAPPC12-214ENST00000462983 TDRD9Q8NDG6 1382 aaKnown RBP15.85■□□□□ 0.13
TRAPPC12-214ENST00000462983 PBRM1Q86U86 1689 aa15.79■□□□□ 0.12
TRAPPC12-214ENST00000462983 CHD1O14646 1710 aa15.79■□□□□ 0.12
TRAPPC12-214ENST00000462983 ABCA10Q8WWZ4 1543 aa15.78■□□□□ 0.12
TRAPPC12-214ENST00000462983 ABCA5Q8WWZ7 1642 aa15.76■□□□□ 0.11
TRAPPC12-214ENST00000462983 GAPVD1Q14C86 1478 aa15.74■□□□□ 0.11
TRAPPC12-214ENST00000462983 SNAPC4Q5SXM2 1469 aa15.73■□□□□ 0.11
TRAPPC12-214ENST00000462983 GRIN2BQ13224 1484 aa15.72■□□□□ 0.11
TRAPPC12-214ENST00000462983 OSCARQ8IYS5 282 aa15.72■□□□□ 0.11
TRAPPC12-214ENST00000462983 FBLN2P98095 1184 aa15.7■□□□□ 0.1
TRAPPC12-214ENST00000462983 MAGI1Q96QZ7 1491 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC12-214ENST00000462983 CHMP7Q8WUX9 453 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC12-214ENST00000462983 SYNJ2O15056 1496 aa15.62■□□□□ 0.09
TRAPPC12-214ENST00000462983 ADAMTS12P58397 1594 aa15.61■□□□□ 0.09
TRAPPC12-214ENST00000462983 ERICH3Q5RHP9 1530 aa15.6■□□□□ 0.09
TRAPPC12-214ENST00000462983 KIF27Q86VH2 1401 aa15.57■□□□□ 0.08
TRAPPC12-214ENST00000462983 TRIM41Q8WV44 630 aa15.55■□□□□ 0.08
TRAPPC12-214ENST00000462983 FHAD1B1AJZ9 1412 aa15.54■□□□□ 0.08
TRAPPC12-214ENST00000462983 GRIN2AQ12879 1464 aa15.53■□□□□ 0.08
TRAPPC12-214ENST00000462983 RIMBP3CA6NJZ7 1639 aa15.53■□□□□ 0.08
TRAPPC12-214ENST00000462983 RIMBP3BA6NNM3 1639 aa15.53■□□□□ 0.08
TRAPPC12-214ENST00000462983 RIMBP3Q9UFD9 1639 aa15.53■□□□□ 0.08
TRAPPC12-214ENST00000462983 CHIC1Q5VXU3 224 aa15.52■□□□□ 0.08
TRAPPC12-214ENST00000462983 CLASP1Q7Z460 1538 aa15.52■□□□□ 0.07
TRAPPC12-214ENST00000462983 CUL7Q14999 1698 aa15.5■□□□□ 0.07
TRAPPC12-214ENST00000462983 CEP170Q5SW79 1584 aa15.49■□□□□ 0.07
TRAPPC12-214ENST00000462983 IGF1RP08069 1367 aa15.49■□□□□ 0.07
TRAPPC12-214ENST00000462983 ARHGEF11O15085 1522 aa15.48■□□□□ 0.07
TRAPPC12-214ENST00000462983 RUSC2Q8N2Y8 1516 aa15.48■□□□□ 0.07
TRAPPC12-214ENST00000462983 NUP160Q12769 1436 aa15.44■□□□□ 0.06
TRAPPC12-214ENST00000462983 CARMIL1Q5VZK9 1371 aa15.41■□□□□ 0.06
TRAPPC12-214ENST00000462983 SHROOM2Q13796 1616 aa15.37■□□□□ 0.05
TRAPPC12-214ENST00000462983 ARAP1Q96P48 1450 aa15.36■□□□□ 0.05
TRAPPC12-214ENST00000462983 CYB5RLQ6IPT4 315 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms